BSR-Based Allele Calling Algorithm
PhyloTrace is a GUI platform for bacterial monitoring offering a toolkit of analyses like hashed cgMLST typing and Antimicrobial Resistance Screening.
Fast cgMLST/wgMLST allele caller with SIMD Smith-Waterman scoring (parasail) and an offline schema-side minimizer-overlap audit. 10.7–22.3× faster than chewBBACA with 100% DNA-sequence agreement on bilaterally callable cells.
Add a description, image, and links to the allele-calling topic page so that developers can more easily learn about it.
To associate your repository with the allele-calling topic, visit your repo's landing page and select "manage topics."