Legacy project, now part of https://github.com/morphonets/SNT. Bitmap morphometry of neuronal arbors through Sholl
Sholl analysis pipeline for microglial branching, with patch-wise CLAHE preprocessing
An analysis of 88 neurons across two cell types and four species using open reconstruction data from NeuroMorpho.org. Produced four figures, and statistical tests confirming the differences are significant.
Python package for segmentation of axons and morphological analysis.
Quick and dirty way of performing Sholl analysis after tractography
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