This is the implementation of PointIso model presented in the paper "Deep neural network for detecting arbitrary precision peptide features through attention based segmentation" (https://www.nature.com/articles/s41598-021-97669-7 and https://arxiv.org/abs/2009.07250). For any inquiry about running the codes, contact me (Fatema): fzohora@uwaterlo…
A Python package that has functions for featue calculation of protein sequences. Features that are calculated by this package are niched for Epitope prediction.
A prediction model of hemolytic activity and half-life of anti-microbial peptides.
Reproducible and Open-source machine learning simulation framework that predicts peptide biological activity classes from sequence and structural features. PEPclass predicts whether a peptide belongs to one or more of 10 biological activity classes using amino acid composition, physiochemical properties, and 3D structural features extracted.
Projeto básico/simplista de como criar sequências de AMPs com características fisico-químicas específicas.
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