Daphnia gene family evolution.
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Updated
Mar 31, 2025 - R
Daphnia gene family evolution.
This repository contains all scripts used to perform reference-guided genomic assembly from paired end sequence reads and screen for contaminants as was done in Clark et al. 2021. These scripts are designed to assemble the genomes for two strains of Daphnia pulicaria using Daphnia pulex (PA42) as a reference. This repository presents a simplifie…
Effects of methyl farnesoate on male production in Daphnia pulex clones
Quantify structural variants in clonal Daphnia genomes
Estimate age of single-nucleotide polymorphisms from genomes
Evolutionary genomics of shared mutations within the Daphnia pulex species complex.
Nextflow pipeline for de novo hifi genome assembly for Daphnia obtusa
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