Mechanistic Pan-Cancer Signaling Model
The Mitochondrial Disclosure Surface — working monograph v0.3: VDAC1, cardiolipin, and the sequential-sensitization spine. DOI-ready (Zenodo). CC BY 4.0.
Context-dependent pharmacology of cannabidiol: A two-pathway model linking mitochondrial VDAC gating and bioenergetic resilience to selective cytotoxicity
Biochemical Systems Theory Model of TNFα related pathways (Sasidharakurup and Diwakar 2020)
2D epithelial vertex model with energy minimization, cell growth simulation, ACAM import, and comprehensive validation tools
Molecular docking and phytochemical screening of Acalypha indica bioactive compounds against cervical cancer target proteins | AutoDock Vina | ADME | GC-MS
CellDeathSpreading provides spatiotemporal metrics to detect locally propagative ferroptosis and relate collective death dynamics to mechanisms such as lysosome rupture.
ApoCanD: Database of human apoptotic proteins in the context of cancer
Computational design pipeline for cancer-cell self-recognition triggered apoptosis. Operationalises Shriya Rai's conceptual paper. PharmaRL-style infrastructure with Boltz-2 oracle, GRPO post-training, and end-to-end biological simulation.
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