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Options for renormalization during collect_metacells()

Status: Open.

#87 In tanaylab/metacells;

· nynkekatinka opened on Feb 18, 2026

Question about the minimum number of cells required for building metacells

Status: Open.

#86 In tanaylab/metacells;

· sLee0709 opened on Nov 12, 2025

numpy install issues

Status: Open.

#84 In tanaylab/metacells;

· Lil-Psilocybe opened on Jul 25, 2025

Does MetaCell2 perform normalization of raw UMI counts?

Status: Open.

#83 In tanaylab/metacells;

· benchsar opened on Jul 10, 2025

mc.tl.filter_data crash if no excluded genes were marked

Status: Open.

#81 In tanaylab/metacells;

· drorbar opened on Mar 5, 2025

Iterative process for finding lateral genes

Status: Open.

#79 In tanaylab/metacells;

· LoaiNaom opened on Nov 28, 2024

convert MC to Seuratobject format

Status: Open.

#72 In tanaylab/metacells;

· jadewu77 opened on Jul 3, 2024

divide_and_conquer_pipeline Error

Status: Open.

#69 In tanaylab/metacells;

· simonekats opened on Jun 5, 2024

mc.pl.extract_clean_data(full, name="hca_bm.one-pass.clean") crashes jupyter notebook everytime

Status: Open.

#66 In tanaylab/metacells;

· lindsdudley opened on Mar 29, 2024

Format error

Status: Open.

#65 In tanaylab/metacells;

· Ray569743422 opened on Jan 29, 2024

Meaning of aggregated values in metacells

Status: Open.

#63 In tanaylab/metacells;

· annaKett opened on Dec 22, 2023

Is there a way to automate this pipeline?

Status: Open.

#61 In tanaylab/metacells;

· crotoc opened on Nov 21, 2023