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This is a template to use to extend the Sunbeam pipeline. Check out the Sunbeam extensions dev docs for more info.

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sbx_baqlava

Tests Condabot DockerHub

Introduction

sbx_baqlava is a sunbeam extension for .... This pipeline uses ....

Config

  • example_rule_options: Example rule options

Docs

More docs.

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Runs BAQLaVa on decontaminated reads.

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