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The same SAM file input yields different results than the Syri software

Status: Open.

#16 In schneebergerlab/fixchr;

· qz1024 opened on May 14, 2026

Chromosomes IDs do not match in the two genomes

Status: Open.

#15 In schneebergerlab/fixchr;

· majssssa opened on Oct 28, 2025

What is the output of fixchr?

Status: Open.

#13 In schneebergerlab/fixchr;

· Surbhigrewal opened on Mar 6, 2025

How to keep original order of contigs?

Status: Open.

#12 In schneebergerlab/fixchr;

· carla-hazelf opened on Feb 15, 2024

bioconda package

Status: Open.

#11 In schneebergerlab/fixchr;

· mbhall88 opened on Jan 17, 2024

--prefix not used

enhancementNew feature or requestNew feature or request

Status: Open.

#8 In schneebergerlab/fixchr;

· webbchen opened on Oct 30, 2023