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Contrasting heat stress response patterns of coral holobionts across the Red Sea suggest distinct mechanisms of thermal tolerance

analysis workflow and scripts for the 'CBASS84' manuscript; broadly separated into:

  • PAM Fv/Fm ED50 analysis
  • RNA-Seq based coral host single nucleotide polymorphism (SNP) analysis
  • coral host gene expression (RNA-Seq)
  • microalgal gene expression (RNA-Seq)
  • microalgal community typing (ITS2, SymPortal)
  • bacterial community typing (16S)

The paper is published open access and accessible here https://onlinelibrary.wiley.com/doi/10.1111/mec.16064

The work integrates coral physiology using the Coral Bleaching Automated Stress System (CBASS) in combination with coral holobiont genomics to elucidate mechanisms of thermal tolerance; it details the Global Search approach (Paul G. Allen Family Foundation)

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analysis workflow and scripts for CBASS84 manuscript

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