Add initial release for python-3.12.10-humanness with dependencies and configuration

[AStaroverov]

Greptile Summary

This PR introduces a new python-3.12.10-humanness run environment for antibody humanness scoring, wiring it into the pnpm workspace, catalogue, and checker whitelist infrastructure following the same conventions as the existing python-3.12.10-* sibling packages.

• New environment package (python-3.12.10-humanness/): declares polars-lts-cpu==1.33.0 and promb==1.0.2 as Python dependencies; package.json mirrors the structure of other environments exactly.
• Checker whitelists: empty JSON objects for Linux and Windows platforms; macOS whitelists include scipy import-failure exemptions (worth confirming these are actually needed transitively through promb).
• Catalogue + workspace wiring: catalogue/package.json, pnpm-workspace.yaml, and pnpm-lock.yaml are all updated consistently to include the new package.

Confidence Score: 4/5

Safe to merge; the change adds a new standalone package and does not touch any shared build or runtime logic.

The package structure and workspace wiring are consistent with every other sibling environment. The two open questions — whether the macOS scipy whitelist entries are truly needed by promb's transitive closure, and whether polars-lts-cpu should be 1.33.1 to match the rest of the monorepo — are low-risk and won't block correctness, but they're worth a quick confirmation before the environment ships to users.

python-3.12.10-humanness/config.json (polars version) and checker/whitelists/python-3.12.10-humanness/macosx-*.json (scipy entries) deserve a second look.

Important Files Changed

Filename	Overview
python-3.12.10-humanness/config.json	Declares polars-lts-cpu==1.33.0 and promb==1.0.2; version of polars-lts-cpu is one patch behind other environments in the monorepo (1.33.1).
python-3.12.10-humanness/package.json	New package manifest matching the structure of other python-3.12.10-* environments; no issues found.
checker/whitelists/python-3.12.10-humanness/macosx-aarch64.json	Contains scipy whitelist entries but scipy is not a declared dependency; entries would be flagged as unused by the checker if promb does not transitively pull in scipy.
checker/whitelists/python-3.12.10-humanness/macosx-x64.json	Same scipy whitelist concern as macosx-aarch64.json; error strings are correctly truncated at 100 chars by the auto-generator.
catalogue/package.json	Adds the humanness environment to the catalogue reference and dependency list; structure matches existing entries.
pnpm-workspace.yaml	Adds python-3.12.10-humanness to the workspace packages list; correct placement.
pnpm-lock.yaml	Lock file correctly updated with humanness importer entries resolving catalog versions consistently with other packages.

Flowchart

%%{init: {'theme': 'neutral'}}%%
flowchart TD
    A[pnpm-workspace.yaml] --> B[python-3.12.10-humanness]
    B --> C["config.json: polars-lts-cpu==1.33.0 + promb==1.0.2"]
    B --> D["package.json v0.1.0"]
    D --> E["build: pl-py-builder"]
    E --> F["pydist/ per platform"]
    F --> G["catalogue/package.json: 3.12.10-humanness reference"]
    B --> H["checker/whitelists/python-3.12.10-humanness/"]
    H --> I["linux + windows: empty whitelists"]
    H --> J["macos-aarch64 + macos-x64: scipy whitelist entries"]

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Prompt To Fix All With AI

Fix the following 2 code review issues. Work through them one at a time, proposing concise fixes.

---

### Issue 1 of 2
checker/whitelists/python-3.12.10-humanness/macosx-aarch64.json:1-10
**Scipy whitelist entries with no apparent scipy dependency**

`config.json` only declares `polars-lts-cpu==1.33.0` and `promb==1.0.2`. The scipy whitelist entries in both macOS whitelist files (`macosx-aarch64.json` and `macosx-x64.json`) will only be exercised if `promb` brings in scipy as a transitive dependency. If it doesn't, the checker will report them as unused entries on every run (a warning but not a failure). Can you confirm whether `promb==1.0.2` pulls in scipy transitively? If it doesn't, these entries can be removed to keep the whitelist clean.

### Issue 2 of 2
python-3.12.10-humanness/config.json:3
**Inconsistent `polars-lts-cpu` version across the monorepo**

Both `python-3.12.10-parapred` and `python-3.12.10-scientific-slim` pin `polars-lts-cpu==1.33.1`, but this package pins `1.33.0`. If the older version is intentional (e.g., a compatibility constraint with `promb`), a comment would help; otherwise align with the rest of the workspace to avoid diverging polars behaviour.

```suggestion
    "dependencies": ["polars-lts-cpu==1.33.1", "promb==1.0.2"],
```

_{Reviews (1): Last reviewed commit: "Add initial release for python-3.12.10-h..." | Re-trigger Greptile}

Greptile also left 2 inline comments on this PR.

[gemini-code-assist]

Code Review

This pull request introduces a new Python 3.12.10 run environment (python-3.12.10-humanness) configured with polars-lts-cpu and promb for humanness scoring, along with its corresponding whitelists and workspace integrations. The review feedback correctly points out that the whitelist files for both macosx-aarch64 and macosx-x64 contain incomplete error message patterns for scipy.stats._unuran.unuran_wrapper, which are missing a closing single quote and a question mark at the end of 'SeedSequence.