GitHub - paniccodewriter/resequencing_pipeline: Pipeline for processing resequencing data using Mosaik and GATK

Name		Name	Last commit message	Last commit date
Latest commit History 5 Commits
additionalScripts		additionalScripts
annotate_variants.pl		annotate_variants.pl
calculate_coverage_statistics.pl		calculate_coverage_statistics.pl
calculate_gene_coverage.pl		calculate_gene_coverage.pl
convert_bam_to_snps_indels.pl		convert_bam_to_snps_indels.pl
extra_code.pl		extra_code.pl
filter_fastq.pl		filter_fastq.pl
mySharedFunctions.pm		mySharedFunctions.pm
mySharedVariables.pm		mySharedVariables.pm
process_annovar_output.pl		process_annovar_output.pl
resequencing_pipeline.conf		resequencing_pipeline.conf
run_exome_analysis.pl		run_exome_analysis.pl