Repositories list

• scmcp-shared

  Public
  A shared function library for scmcphub

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •44 forks•11 star•00 issues•00 pull requests•Updated Nov 29, 2025Nov 29, 2025

• sclab

  Public
  sclab - A smart assistant that connects powerful AI to your single cell world

  TypeScript

  •

  Apache License 2.0

  •712712 forks•00 stars•00 issues•00 pull requests•Updated Aug 29, 2025Aug 29, 2025

• biomarker-mcp

  Public
  Python

  •00 forks•33 stars•11 issue•00 pull requests•Updated Aug 20, 2025Aug 20, 2025

• docs

  Public
  MDX

  •00 forks•00 stars•00 issues•00 pull requests•Updated Jul 23, 2025Jul 23, 2025

• scmcp

  Public
  An MCP server for scRNA-Seq analysis with natural language!

  agentaimcp+ 2

  agentaimcpscrna-seqllm

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •55 forks•1515 stars•44 issues•00 pull requests•Updated Jul 10, 2025Jul 10, 2025

• scanpy-mcp

  Public
  MCP server for scanpy

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •33 forks•22 stars•11 issue•00 pull requests•Updated Jun 27, 2025Jun 27, 2025

• liana-mcp

  Public
  Natural language interface for scRNA-Seq analysis with Liana through MCP

  Python

  •00 forks•11 star•00 issues•00 pull requests•Updated Jun 27, 2025Jun 27, 2025

• infercnv-mcp

  Public
  MCP server for CNV analysis using infercnv

  Python

  •11 fork•22 stars•00 issues•00 pull requests•Updated Jun 27, 2025Jun 27, 2025

• decoupler-mcp

  Public
  MCP server for biological activities analysis using decoupler

  Python

  •33 forks•44 stars•00 issues•00 pull requests•Updated Jun 27, 2025Jun 27, 2025

• cellrank-mcp

  Public
  MCP server for trajectory inference using cellrank

  Python

  •11 fork•22 stars•00 issues•00 pull requests•Updated Jun 27, 2025Jun 27, 2025

• .github

  Public
  00 forks•00 stars•00 issues•00 pull requests•Updated Jun 6, 2025Jun 6, 2025

• scmcphub.github.io

  Public
  scmcphub website

  HTML

  •00 forks•00 stars•00 issues•00 pull requests•Updated May 16, 2025May 16, 2025