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    13 repositories

    • GBS_tutorial

      Public
      Tutorial on analyzing GBS data
      Shell
      •0•0•0•0•Updated Apr 20, 2026Apr 20, 2026

    • Did_you_cook_today

      Public
      Recipe Gift for Dr.Elphinstone and Dr.Moxley
      3•0•0•2•Updated Apr 2, 2026Apr 2, 2026

    • Comparative_genomics

      Public
      Comparative genomics of Arctic plants
      Shell
      •2•0•0•0•Updated Feb 26, 2025Feb 26, 2025

    • Population_genomics_Cassiope

      Public
      Step by step notes for analyzing the GBS data from 40 circumpolar populations of Cassiope tetragona
      OpenEdge ABL
      •1•0•0•0•Updated Aug 17, 2023Aug 17, 2023

    • CAP_Snakemake

      Public
      Cannabis Annotation Pipeline using Snakemake
      Python
      •
      GNU General Public License v3.0
      •1•0•0•0•Updated Sep 21, 2021Sep 21, 2021

    • sgd-website

      Public
      sunflower genome database website
      HTML
      •
      MIT License
      •4•0•0•0•Updated Oct 16, 2020Oct 16, 2020

    • ubc-sunflower-genome

      Public
      AWS Open Dataset -- Sunflower Genome Documentation and Metadata
      HTML
      •0•0•0•0•Updated Jun 23, 2020Jun 23, 2020

    • variants2019

      Public
      experiment setup for recalling variants
      Python
      •0•0•0•0•Updated Jun 2, 2020Jun 2, 2020

    • bunnies

      Public
      Reproducible data-driven research framework
      Python
      •
      Apache License 2.0
      •0•6•2•0•Updated Jun 2, 2020Jun 2, 2020

    • open-data-registry

      Public
      A registry of publicly available datasets on AWS
      Python
      •
      Apache License 2.0
      •1.2k•0•0•0•Updated Apr 9, 2020Apr 9, 2020

    • tranche-plot-arrange

      Public
      Random scripts to tweak GATK's VariantRecalibrator tranche plots in a format suitable for pub.
      R
      •
      MIT License
      •0•0•0•0•Updated Sep 30, 2019Sep 30, 2019

    • fastq-examples

      Public
      Example sunflower fastq files for testing
      Python
      •0•2•2•0•Updated Jul 19, 2019Jul 19, 2019

    • wild_gwas_2018

      Public
      R
      •4•0•0•0•Updated May 15, 2019May 15, 2019
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