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    12 repositories

    • Engel_Warp_Pipeline

      Public
      Shell
      •0•4•0•0•Updated Aug 5, 2026Aug 5, 2026

    • cryoet-scripts

      Public
      Miscellaneous scripts for processing cryo-ET data
      Python
      •1•23•0•0•Updated Jul 29, 2026Jul 29, 2026

    • slabify-et

      Public
      A CLI tool to segment the lamella slab in cryo-ET volumes
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •2•16•2•0•Updated Jul 6, 2026Jul 6, 2026

    • membrain-pick

      Public
      Python
      •3•10•10•1•Updated Mar 3, 2026Mar 3, 2026

    • membrain-stats

      Public
      Python
      •2•2•2•0•Updated Nov 19, 2025Nov 19, 2025

    • stopgap-addons

      Public
      A set of add-ons for enhancing the STOPGAP experience.
      Shell
      •0•3•0•0•Updated Sep 10, 2025Sep 10, 2025

    • chlamydataset2relion5

      Public archive
      Python script to import pre-processed results from the Chlamy dataset (EMPIAR-11830) into Relion-5
      Python
      •
      MIT License
      •0•2•0•0•Updated Apr 25, 2025Apr 25, 2025

    • membrain_tutorial_scripts

      Public
      Jupyter Notebook
      •1•2•0•0•Updated Mar 24, 2025Mar 24, 2025

    • MemBrain-v2

      Public
      This is the main repository for MemBrain v2. It includes MemBrain-seg, MemBrain-pick, MemBrain-stats, and several Napari tools.
      Shell
      •2•24•3•0•Updated Jan 29, 2025Jan 29, 2025

    • napari-lasso-3d

      Public
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •1•6•7•0•Updated Jan 9, 2025Jan 9, 2025

    • relion5-scripts

      Public
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •0•10•0•0•Updated Sep 9, 2024Sep 9, 2024

    • MemBrain

      Public
      Python
      •
      Mozilla Public License 2.0
      •2•37•1•0•Updated Jun 22, 2023Jun 22, 2023
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