Merge in upstream changes#4
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Previously, observing lines in Fasta files prior to the initial ">" was previously seen as comments. This behaviour was depricated from BioPython release 1.85. This causes an ValueError in reading prokka GFFs, as the fasta is passed with '##FASTA'. *Solution*: Try and except statement excepts the ValueError thrown by BioPython >=1.85 and makes use of format='fasta-pearson' to allow inital Fasta lines, before ">"
…python Handling bad fasta parsing
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