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@neuromodulation

Neumann Lab @ Charité Berlin and Wyss Center Geneva

Interventional and Cognitive Neuromodulation

Welcome to the Neumann Group | Interventional and Cognitive Neuromodulation

Welcome to the Neumann Group, currently located both at Charité in Berlin and at the Wyss Center for Bio and Neuroengineering in Geneva! We provide research software, analysis pipelines, datasets, and collaborative projects developed within our group and with our collaborators worldwide.

We develop methods for invasive and non-invasive neuromodulation, adaptive deep brain stimulation, electrophysiology, neural decoding, connectomics, and real time neurophysiology analysis. Our work combines translational neuroscience, machine learning, signal processing, and neuroengineering with a strong focus on reproducible and open science.

Highlights

  • Open-source code and tools for neuromodulation research
  • Reproducible datasets and analysis pipelines
  • Active collaborations across academia and industry

Research Areas

  • Adaptive and closed loop neuromodulation
  • Deep Brain Stimulation (DBS)
  • Electrophysiology and intracranial recordings
  • Neural decoding and machine learning
  • Brain computer interfaces
  • Connectomics and network neuroscience
  • Translational neurotechnology

Featured Projects

Core Toolboxes

Real time analysis framework for intracranial neurophysiology recordings, including oscillatory biomarkers, burst analysis, connectivity metrics, feature extraction, machine learning pipelines, and neural decoding workflows.

📄 Associated publication:
Merk et al. py_neuromodulation: Real time analysis of intracranial neurophysiology recordings
Journal of Open Source Software (JOSS), 2025
https://joss.theoj.org/papers/10.21105/joss.08258


A python implementation of the PARRM algorithm for removing periodic stimulation artefacts from electrophysiology recordings during deep brain stimulation.


A MATLAB toolbox for extracting and processing recordings from the Medtronic Percept bidirectional DBS platform.

Developed as a collaboration between the Brain Modulation Lab and the Neumann Group by Lucia Poma, DBSAnnotator is an open source platform for annotating and analyzing DBS related electrophysiology recordings and behavioral data.

Other research Software

  • AcrossPatientDecodingModel
    Open-weight cross-patient neural decoding models for invasive electrophysiology.

  • WJN Toolbox
    A MATLAB-based electrophysiology and neuroimaging analysis toolbox.

Open Datasets

eLife

Electrophysiological biomarkers of motor decoding and adaptive neuromodulation

This work investigates electrophysiological biomarkers relevant for adaptive neuromodulation and motor decoding.

📄 Paper:
https://elifesciences.org/articles/75126

📦 Public dataset:
https://doi.org/10.7910/DVN/IO2FLM

Open Science

We strongly believe in transparent, reproducible, and collaborative neuroscience.

This organization hosts:

  • Open source analysis frameworks
  • Reproducible research pipelines
  • Public datasets
  • Signal processing toolboxes
  • Methods for adaptive neuromodulation research
  • Translational neurotechnology software

Pinned Loading

  1. py_neuromodulation py_neuromodulation Public

    Real-time analysis of intracranial neurophysiology recordings.

    Python 76 22

  2. perceive perceive Public

    This repository contains MATLAB code to extract data from the Medtronic Percept bidirectional brain computer interface device for adaptive deep brain stimulation.

    MATLAB 42 23

  3. PyPARRM PyPARRM Public

    Python port of the PARRM algorithm for removing periodic artefacts from signals.

    Python 8 6

  4. manuscript-binns_cortex_stn_comm manuscript-binns_cortex_stn_comm Public

    Code for preprocessing, analysis, and plotting used in Binns et al. (2025), Nature Communications, DOI: 10.1038/s41467-025-58825-z

    Python 4 2

  5. PD-neural-symptom-decoding-inference PD-neural-symptom-decoding-inference Public

    Jupyter Notebook

  6. AcrossPatientDecodingModel AcrossPatientDecodingModel Public

    Python 1

Repositories

Showing 10 of 22 repositories

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