mary77/netImpute
Folders and files
| Name | Name | Last commit date | ||
|---|---|---|---|---|
Repository files navigation
How to run: netImputeObj = netImpute() # load data (rows are genes and cols are cells) data = utils.load_data(data_path) # preProcessing (Optinal, remove unexpressed genes) data = netImputeObj.preProcessing(data) # library size normalization if data is not normalized data = netImputeObj.libSizeNorm(data) dataImputed = netImputeObj.impute(data, alpha = 0.5)