fix: repair the June-24 identity fork with audited dedupe migrations, alias-first import identity, and doctor parity

content/skills/loaf-reference/SKILL.md

@@ -62,7 +62,7 @@ Names and one-line purposes only. Run `loaf <command> --help` for options, argum
 | `loaf docs` | Manage docs/ indexing | index |
 | `loaf change` | Shape-first Change artifacts: git-canonical work context under docs/changes/ | init, check, list |
 | `loaf render` | Maintain committed durable Markdown renders | sweep |
-| `loaf state` | Manage native SQLite state | path, status, init, doctor, repair legacy-project-database, repair relationship-origin, repair journal-search, migrate markdown, migrate storage-home, migrate schema, migrate deferrals, migrate lifecycle-statuses, migrate journal-first, backup, backup verify, backup restore, restore-ephemerals, verify-ephemerals, export, export all, export triage, export spec, export release-readiness |
+| `loaf state` | Manage native SQLite state | path, status, init, doctor, repair legacy-project-database, repair relationship-origin, repair journal-search, migrate markdown, migrate storage-home, migrate schema, migrate deferrals, migrate lifecycle-statuses, migrate alias-orphans, migrate journal-duplicates, migrate journal-first, backup, backup verify, backup restore, restore-ephemerals, verify-ephemerals, export, export all, export triage, export spec, export release-readiness |
 | `loaf journal` | Record and read the project-scoped journal (the durable record across all conversations) | log, recent, search, show, context, export, defer |
 | `loaf project` | Manage durable project identity | list, show, identity, rename, move, delete |
 | `loaf migrate` | Run native migration workflows | markdown, storage-home, schema, lifecycle-statuses, journal-first, worktree-storage |

dist/amp/skills/loaf-reference/SKILL.md

@@ -68,7 +68,7 @@ Names and one-line purposes only. Run `loaf <command> --help` for options, argum
 | `loaf docs` | Manage docs/ indexing | index |
 | `loaf change` | Shape-first Change artifacts: git-canonical work context under docs/changes/ | init, check, list |
 | `loaf render` | Maintain committed durable Markdown renders | sweep |
-| `loaf state` | Manage native SQLite state | path, status, init, doctor, repair legacy-project-database, repair relationship-origin, repair journal-search, migrate markdown, migrate storage-home, migrate schema, migrate deferrals, migrate lifecycle-statuses, migrate journal-first, backup, backup verify, backup restore, restore-ephemerals, verify-ephemerals, export, export all, export triage, export spec, export release-readiness |
+| `loaf state` | Manage native SQLite state | path, status, init, doctor, repair legacy-project-database, repair relationship-origin, repair journal-search, migrate markdown, migrate storage-home, migrate schema, migrate deferrals, migrate lifecycle-statuses, migrate alias-orphans, migrate journal-duplicates, migrate journal-first, backup, backup verify, backup restore, restore-ephemerals, verify-ephemerals, export, export all, export triage, export spec, export release-readiness |
 | `loaf journal` | Record and read the project-scoped journal (the durable record across all conversations) | log, recent, search, show, context, export, defer |
 | `loaf project` | Manage durable project identity | list, show, identity, rename, move, delete |
 | `loaf migrate` | Run native migration workflows | markdown, storage-home, schema, lifecycle-statuses, journal-first, worktree-storage |

dist/codex/skills/loaf-reference/SKILL.md

@@ -68,7 +68,7 @@ Names and one-line purposes only. Run `loaf <command> --help` for options, argum
 | `loaf docs` | Manage docs/ indexing | index |
 | `loaf change` | Shape-first Change artifacts: git-canonical work context under docs/changes/ | init, check, list |
 | `loaf render` | Maintain committed durable Markdown renders | sweep |
-| `loaf state` | Manage native SQLite state | path, status, init, doctor, repair legacy-project-database, repair relationship-origin, repair journal-search, migrate markdown, migrate storage-home, migrate schema, migrate deferrals, migrate lifecycle-statuses, migrate journal-first, backup, backup verify, backup restore, restore-ephemerals, verify-ephemerals, export, export all, export triage, export spec, export release-readiness |
+| `loaf state` | Manage native SQLite state | path, status, init, doctor, repair legacy-project-database, repair relationship-origin, repair journal-search, migrate markdown, migrate storage-home, migrate schema, migrate deferrals, migrate lifecycle-statuses, migrate alias-orphans, migrate journal-duplicates, migrate journal-first, backup, backup verify, backup restore, restore-ephemerals, verify-ephemerals, export, export all, export triage, export spec, export release-readiness |
 | `loaf journal` | Record and read the project-scoped journal (the durable record across all conversations) | log, recent, search, show, context, export, defer |
 | `loaf project` | Manage durable project identity | list, show, identity, rename, move, delete |
 | `loaf migrate` | Run native migration workflows | markdown, storage-home, schema, lifecycle-statuses, journal-first, worktree-storage |

dist/cursor/skills/loaf-reference/SKILL.md

@@ -68,7 +68,7 @@ Names and one-line purposes only. Run `loaf <command> --help` for options, argum
 | `loaf docs` | Manage docs/ indexing | index |
 | `loaf change` | Shape-first Change artifacts: git-canonical work context under docs/changes/ | init, check, list |
 | `loaf render` | Maintain committed durable Markdown renders | sweep |
-| `loaf state` | Manage native SQLite state | path, status, init, doctor, repair legacy-project-database, repair relationship-origin, repair journal-search, migrate markdown, migrate storage-home, migrate schema, migrate deferrals, migrate lifecycle-statuses, migrate journal-first, backup, backup verify, backup restore, restore-ephemerals, verify-ephemerals, export, export all, export triage, export spec, export release-readiness |
+| `loaf state` | Manage native SQLite state | path, status, init, doctor, repair legacy-project-database, repair relationship-origin, repair journal-search, migrate markdown, migrate storage-home, migrate schema, migrate deferrals, migrate lifecycle-statuses, migrate alias-orphans, migrate journal-duplicates, migrate journal-first, backup, backup verify, backup restore, restore-ephemerals, verify-ephemerals, export, export all, export triage, export spec, export release-readiness |
 | `loaf journal` | Record and read the project-scoped journal (the durable record across all conversations) | log, recent, search, show, context, export, defer |
 | `loaf project` | Manage durable project identity | list, show, identity, rename, move, delete |
 | `loaf migrate` | Run native migration workflows | markdown, storage-home, schema, lifecycle-statuses, journal-first, worktree-storage |

dist/opencode/skills/loaf-reference/SKILL.md

@@ -68,7 +68,7 @@ Names and one-line purposes only. Run `loaf <command> --help` for options, argum
 | `loaf docs` | Manage docs/ indexing | index |
 | `loaf change` | Shape-first Change artifacts: git-canonical work context under docs/changes/ | init, check, list |
 | `loaf render` | Maintain committed durable Markdown renders | sweep |
-| `loaf state` | Manage native SQLite state | path, status, init, doctor, repair legacy-project-database, repair relationship-origin, repair journal-search, migrate markdown, migrate storage-home, migrate schema, migrate deferrals, migrate lifecycle-statuses, migrate journal-first, backup, backup verify, backup restore, restore-ephemerals, verify-ephemerals, export, export all, export triage, export spec, export release-readiness |
+| `loaf state` | Manage native SQLite state | path, status, init, doctor, repair legacy-project-database, repair relationship-origin, repair journal-search, migrate markdown, migrate storage-home, migrate schema, migrate deferrals, migrate lifecycle-statuses, migrate alias-orphans, migrate journal-duplicates, migrate journal-first, backup, backup verify, backup restore, restore-ephemerals, verify-ephemerals, export, export all, export triage, export spec, export release-readiness |
 | `loaf journal` | Record and read the project-scoped journal (the durable record across all conversations) | log, recent, search, show, context, export, defer |
 | `loaf project` | Manage durable project identity | list, show, identity, rename, move, delete |
 | `loaf migrate` | Run native migration workflows | markdown, storage-home, schema, lifecycle-statuses, journal-first, worktree-storage |

dist/skills/loaf-reference/SKILL.md

@@ -67,7 +67,7 @@ Names and one-line purposes only. Run `loaf <command> --help` for options, argum
 | `loaf docs` | Manage docs/ indexing | index |
 | `loaf change` | Shape-first Change artifacts: git-canonical work context under docs/changes/ | init, check, list |
 | `loaf render` | Maintain committed durable Markdown renders | sweep |
-| `loaf state` | Manage native SQLite state | path, status, init, doctor, repair legacy-project-database, repair relationship-origin, repair journal-search, migrate markdown, migrate storage-home, migrate schema, migrate deferrals, migrate lifecycle-statuses, migrate journal-first, backup, backup verify, backup restore, restore-ephemerals, verify-ephemerals, export, export all, export triage, export spec, export release-readiness |
+| `loaf state` | Manage native SQLite state | path, status, init, doctor, repair legacy-project-database, repair relationship-origin, repair journal-search, migrate markdown, migrate storage-home, migrate schema, migrate deferrals, migrate lifecycle-statuses, migrate alias-orphans, migrate journal-duplicates, migrate journal-first, backup, backup verify, backup restore, restore-ephemerals, verify-ephemerals, export, export all, export triage, export spec, export release-readiness |
 | `loaf journal` | Record and read the project-scoped journal (the durable record across all conversations) | log, recent, search, show, context, export, defer |
 | `loaf project` | Manage durable project identity | list, show, identity, rename, move, delete |
 | `loaf migrate` | Run native migration workflows | markdown, storage-home, schema, lifecycle-statuses, journal-first, worktree-storage |

docs/changes/20260807-state-dedupe/receipts/verify.json

@@ -0,0 +1,122 @@
+{
+  "schema_version": 2,
+  "change": "state-dedupe",
+  "verified_commit": "2f4a9e5680fbf14933ec3f6e24d1a3e38c82bff4",
+  "verified_root_tree": "2883589a39c16f1cc4cd19c182944dcaf21247d0",
+  "verified_at": "2026-08-09T01:40:34Z",
+  "criteria_digest": "9947e96459453f0a5ee2f965cf50f0b7ef770444f928562a5a93a0b4889c0ebb",
+  "scope_digest": "f69f338b54e4fe1109009a45bd844845f9739da2336394255c8e8f49aaa61daa",
+  "scope_sections": {
+    ".agents": "0cdcb499203f22e1faebbef89e211e4b6d4b253bc5486866ed28a50e15c2dd9e",
+    ".claude": "8dc123c00b953695edd9ccc4bb966e986bcea05607d9a125e71038a4c2ebb6be",
+    ".github": "1620d60edd726d78c03e1810a690c54669d4dbca40699b4489125696f1b28525",
+    ".gitignore": "4ec1c977b3002200cfe2c9a652cbbe1cb31e934d12a7c0029b1dd6cdc668099a",
+    ".serena": "749668b92acde130ae6a4514f59b9e08bf7095c8bdd47b6b2e5929b0729ba91f",
+    "AGENTS.md": "96a27c8deab6683f3c9ae669520ed0ed8cd2f22bc71231af8e00e205a7ea71e6",
+    "README.md": "32cecbbf375e1b689ac4702acc72a81f5ad89be495f87680524b1fcd76f5089b",
+    "cli": "cccb406db757aa65127b9657fde0c8a20c722c9ec9e3ae16269d1c0b3c21208a",
+    "cmd": "3d4f455f2eea30cecbef4ea78280e6b86b5b48033074369f476a1805d513d217",
+    "config": "ed88cb91f75fb35580ffe31433b1664efc91f31253abba6a27a645ddb009ae09",
+    "content": "869587ab6ca70cb7620dfe09ada7a87a8155898b8473aa17ddd32e510ab73828",
+    "docs": "c9f38d5ed12702698ddd94f14d5a84e9746fff71895f1fc6aeafc8184bb0851d",
+    "go.mod": "b9247690761e43ce92335c553e1f916132580b2a1e7f434c7d99742e56fb8b21",
+    "go.sum": "44a5d68a99a05f3d9aff3321f4b5645d0870cc1afd36e183fbc08c07d8550d6b",
+    "internal": "093982eb7c220d000b84b8eb643661d4b9e339a06d114163f5283bf6e2f163fb",
+    "package-lock.json": "9a3e1b4d99a42b2fefa998dd5c753c1f00ee12a43d1a477b674fe04e6c779f01"
+  },
+  "exclusions": [
+    "docs/changes/*/receipts/**",
+    "docs/changes/*/reports/**",
+    "package.json",
+    ".claude-plugin/marketplace.json",
+    "CHANGELOG.md",
+    "dist/**",
+    "plugins/**",
+    "bin/**"
+  ],
+  "digest_spec": "v1",
+  "tool_version": "0.2.20",
+  "toolchain": {
+    "go": "1.26.5",
+    "os": "darwin",
+    "arch": "arm64"
+  },
+  "worktree_clean": true,
+  "results": [
+    {
+      "id": "V1",
+      "command": "go test ./internal/state -run 'AliasOrphan' -count=1",
+      "exit_code": 0,
+      "output_digest": "7440b3f39d37c66c45ccfe537c30b2416ce08190ec2a806d056f380c4ef7350e",
+      "ok": true,
+      "expect": "exit 0.",
+      "expect_checks": [
+        {
+          "kind": "exit",
+          "value": "0",
+          "ok": true
+        }
+      ]
+    },
+    {
+      "id": "V2",
+      "command": "go test ./internal/state -run 'ImportAliasFirst' -count=1",
+      "exit_code": 0,
+      "output_digest": "e845c5b2606eb00052422cb37dae96c5123333538541ce34d42492e543b7efaa",
+      "ok": true,
+      "expect": "exit 0.",
+      "expect_checks": [
+        {
+          "kind": "exit",
+          "value": "0",
+          "ok": true
+        }
+      ]
+    },
+    {
+      "id": "V3",
+      "command": "go test ./... -run 'AliasParity' -count=1",
+      "exit_code": 0,
+      "output_digest": "1b3e6a16b7b8079aa560fb2c833280990e9a5dae2e13cd17c51e14ade000802d",
+      "ok": true,
+      "expect": "exit 0.",
+      "expect_checks": [
+        {
+          "kind": "exit",
+          "value": "0",
+          "ok": true
+        }
+      ]
+    },
+    {
+      "id": "V4",
+      "command": "go test ./...",
+      "exit_code": 0,
+      "output_digest": "41852648a8b4ea3df781fcb34395bfebf21796b861376e9175b73463ac53833c",
+      "ok": true,
+      "expect": "exit 0.",
+      "expect_checks": [
+        {
+          "kind": "exit",
+          "value": "0",
+          "ok": true
+        }
+      ]
+    },
+    {
+      "id": "V5",
+      "command": "go test ./internal/state -run 'JournalDuplicate' -count=1",
+      "exit_code": 0,
+      "output_digest": "2c8c42a2d80f0c91ed00a3a451c2e1848fabc97650639bdd4ce5e24040685fe5",
+      "ok": true,
+      "expect": "exit 0.",
+      "expect_checks": [
+        {
+          "kind": "exit",
+          "value": "0",
+          "ok": true
+        }
+      ]
+    }
+  ]
+}