Ion channels enable electrical communication in bacterial communities

Arthur Prindle, Jintao Liu, Munehiro Asally, San Ly, Jordi Garcia-Ojalvo, and Gürol M. Süel

This repository contains the code to reproduce the modeling figures of the paper by Prindle et al, published in Nature 527, 59–63, 2015 (doi: [10.1038/nature15709] (https://doi.org/10.1038/nature15709)). It includes the following:

• fig3d.ipynb: self-contained Jupyter notebook to generate Figure 3d from the paper.
• fig3e.ipynb: Jupyter notebook to generate Figure 3e. This notebook compiles and runs the C program kch1d.c, and plots the correspoding results. It requires the C compiler cc and the utility make, which are available by default in Linux, or by installing the Xcode development environment in Mac OS X.