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jbloomlab / polyclonal Public

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Fixe bug in `PolyclonalAverage` when sequential integer sites are being used#190

Merged

jbloom merged 6 commits into

mainjbloomlab/polyclonal:mainfrom

PolyclonalAverage-site-bugjbloomlab/polyclonal:PolyclonalAverage-site-bugCopy head branch name to clipboard

Dec 12, 2025

Conversation Commits6 (6)Checks Files changed

Merged

Fixe bug in `PolyclonalAverage` when sequential integer sites are being used#190
jbloom merged 6 commits into
mainfrom
PolyclonalAverage-site-bug

Commits

Commits on Dec 12, 2025

Fixe bug in `PolyclonalAverage` when sequential integer sites are being used
jbloom
committed
test on Python 3.12 rather than 3.11
jbloom
committed
make `pdb_utils` pass doctest
jbloom
committed
do not mutate `models_df` in `PolyclonalAverage`, make copy
jbloom
committed
epitope harmonization returns deepcopy of original model if just one epitope, reverted earlier change to how sequential sites handled
jbloom
committed
increase test tolerance in `reference_site_numbering` to accommodate numerical precision variation
jbloom
committed

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