This repository is for sharing an analysis to prioritize ~12k cardiomyocyte genes to perturb in order to understand siRNA-based therapeutic delivery.
This is not a published project, so not all data is available. In particular, the "liangfu" dataset referenced in the project is not yet available.
To rerun this pipeline, use snakemake=7.32.4. This pipeline is intended to run on an HPC using slurm. The pipeline is completely self-contained (save for the currently unpublished dataset).