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gravityeffect1/README.md

Typing SVG

Hi! I'm Sara, welcome to my little coding biosphere.


"Natura non facit saltus." — Linnaeus  ·  nature does not make leaps

∿ about me

· Carol Davila University of Medicine

Second-year medical student with a parallel obsession with code, specifically, making deep learning useful in clinical and biological contexts. I care most about problems where the biology is genuinely hard and the data is genuinely messy.

I am drawn to cardiology and oncology as future specialties: two fields where programming and medicine are converging fastest.

  • location → Bucharest, Romania 🇷🇴
  • languages → Romanian · English · Français · Deutsch

⬡ research interests

  • Deep learning for medical imaging, pathology & multi-omics
  • Computational Medicine
  • Cancer genomics & oncoproteomics
  • CRISPR guide RNA design & off-target prediction
  • Microbial classification
  • Cardiac electrophysiology (aspiring)

⌬ stack

Python PyTorch TensorFlow Jupyter Streamlit JavaScript

◈ featured work

project what it does
ARROW Automated Cas13 gRNA design platform for SARS-CoV-2
MTCNN_leuco MTCNN-based leukocyte detection pipeline
CysteineBRCA1 Cysteine residue analysis in BRCA1 structural variants
sensa Gemma-powered model — Google Gemma4Good Hackathon
16S-rRNA-Classification ML workflow for microbial community classification
Histo by Gamers HTML5 canvas + R simulation of the lymphatic system

✿ beyond the lab

I'm an introvert who recharges in forests and thinks best with a stylus in hand. What I love doing most, when I'm not swamped with exams:

  • embroidery
  • drawing — both digital and traditional; mostly anatomy and odd, funny little creature designs - also, ponies! hardcore MLP fan here!
  • reading high-fantasy books and re-analysing the political dynamics between the elves of Mirkwood and the dwarves of Erebor.
  • video games — player and hobbyist game dev; HTML5 canvas and R are my playground; Horizon Zero Dawn & Assassin's Creed enjoyer
  • writing — I keep a blog: neural-decay, which is my digital diary of thoughts and observations
  • catching up on new articles on cellular biology and computational biology
  • people watching & daydreaming
  • tinkering & fixing my jewerly
  • playing with my Zeiss microscope

Pinned Loading

  1. MTCNN_leuco MTCNN_leuco Public

    This pipeline captures a live webcam feed, classifies the viewer's facial emotion into one of four affective states (Happy · Sad · Angry · Neutral), and immediately displays a corresponding leucocy…

    Python 1

  2. 16S-rRNA-Classification-Workflow 16S-rRNA-Classification-Workflow Public

    This notebook classifies 16S ribosomal RNA gene sequences from Bacillus subtilis and Escherichia coli based on their sequence features. It downloads sequences from GenBank, extracts various composi…

    Jupyter Notebook

  3. ARROW ARROW Public

    ARROW (Automated RNA Recognition and Optimization Workflow) — a browser-based CRISPR-Cas13 guide RNA design platform targeting SARS-CoV-2. Retrieves genomic sequences directly from NCBI GenBank, ap…

    Jupyter Notebook

  4. CysteineBRCA1 CysteineBRCA1 Public

    This Google Colab notebook provides a pipeline to fetch protein data from the UniProt API, extract its sequence, identify Cysteine (C) residue positions, and visualize these positions.

    Jupyter Notebook 1

  5. sensa sensa Public

    Model built using Gemma e E4B for the Gemma4Good Google Hackathon

    Jupyter Notebook 1