INTRO2MODELSNEU

Requirements

Install pixi: https://pixi.prefix.dev/latest/installation/

Quickstart

If you have the Manifest.toml (which you do if you cloned this repo), this is all you need:

git clone git@github.com:dksasaki/intro2modelsNEU.git
cd intro2modelsNEU
pixi install
pixi run instantiate-kernel
pixi run lab

• pixi install — installs Julia, JupyterLab, and conda from pixi.lock
• pixi run instantiate-kernel — installs Julia packages (IJulia, Oceananigans, CairoMakie) from Manifest.toml
• pixi run lab — starts JupyterLab in your browser

First time setup (maintainers only)

If you are starting from scratch without a Manifest.toml:

pixi install
pixi run install-kernel
pixi run install-oceananigans
pixi run install-cairomakie

Then commit Project.toml and Manifest.toml to the repository.

Reproducibility

File	Purpose
pixi.toml	defines system-level dependencies (Julia, JupyterLab, conda)
pixi.lock	pins exact package versions
Project.toml	defines Julia dependencies
Manifest.toml	pins exact Julia package versions

Do not delete any of these files. The .pixi/ directory is local and can be safely removed and recreated with pixi install.