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fly atalses post added - #515

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bahramani:fly-vfb-post
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fly atalses post added#515
bahramani wants to merge 1 commit into
brainglobe:mainfrom
bahramani:fly-vfb-post

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@bahramani

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Description

What is this PR

  • Bug fix
  • Addition of a new feature
  • Other

Why is this PR needed?

This PR announces the addition of two Virtual Fly Brain JRC2018 adult fruit fly atlases to BrainGlobe and adds them to the website atlas documentation.

What does this PR do?

  • Adds one combined blog post for the vfb_jrc2018u_neuropils_fly brain neuropils atlas and the vfb_jrc2018u_vnc_fly ventral nerve cord atlas.
  • Adds vfb_jrc2018u_neuropils_fly and vfb_jrc2018u_vnc_fly entries to the atlas details page.
  • Adds rows for both Virtual Fly Brain atlases to the atlas table.

References

Related atlas resources:

How has this PR been tested?

Local checks:

  • git diff --check
  • Local link sanity check for touched Markdown files
  • Image/GIF file validation

A full Sphinx build was not run locally because Sphinx is not installed in the current local Python environment.

Is this a breaking change?

No.

Does this PR require an update to the documentation?

Yes. This PR is itself a documentation/website update. It adds both Virtual Fly Brain atlases to the atlas table and atlas details page, and adds one combined blog post.

Checklist:

  • The code has been tested locally
  • Tests have been added to cover all new functionality (unit & integration)
  • The documentation has been updated to reflect any changes
  • The code has been formatted with pre-commit


### [Virtual Fly Brain JRC2018Unisex neuropils atlas](https://www.virtualflybrain.org/blog/2022/01/01/jrc-2018-templates-rois-jrc2018/)

This atlas packages the JRC2018Unisex adult _Drosophila melanogaster_ brain

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can you add some detail about why each atlas was created? what the uses for each are, if one supersedes the other, etc

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Is this generated using the original brainrender? We are moving to brainrender-napari, so this should be used instead.


## JRC2018Unisex brain neuropils atlas

The brain atlas packages the [JRC2018Unisex adult fly brain template and

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Suggested change
The brain atlas packages the [JRC2018Unisex adult fly brain template and
This atlas includes the [JRC2018Unisex adult fly brain template and

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3 participants