This repository contains scripts to analyze the Asian Immune Diversity Atlas (AIDA) phase 1 data to perform sQTL mapping for the manuscript "Single-cell RNA-seq links cell type-specific regulation of splicing with complex diseases".
Code and scripts are categorized according to sections from the main manuscript.
Please cite:
Tian, C., Zhang, Y., Tong, Y. et al. Single-cell RNA sequencing of peripheral blood links cell-type-specific regulation of splicing to autoimmune and inflammatory diseases. Nat Genet 56, 2739–2752 (2024). https://doi.org/10.1038/s41588-024-02019-8