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BioXAK (Biology X Analysis Kit) is a free, open-source Windows desktop application that integrates multiple bioinformatics analysis workflows into a single, user-friendly platform. It is designed for wet-lab researchers who need powerful computational biology tools without requiring any programming expertise.
BioXAK is distributed as a self-contained executable requiring no programming knowledge or external runtime installation, and is freely available under the MIT License at https://github.com/bowyung/BioXAK/releases/latest.
| Module | Description |
|---|---|
| 🧬 TCGA Analysis | Cancer genomics analysis using DESeq2-normalized expression data; supports differential expression, survival analysis, and multi-group comparisons with automatic statistical test selection |
| ✂️ CRISPR sgRNA Design | Automated sgRNA candidate generation with off-target scoring and GC content evaluation |
| 💧 Flow Cytometry | FCS file import, biexponential scaling, compensation matrix, and interactive gating |
| 🔬 Primer Design | Primer pair design with Tm calculation, GC content, and hairpin/dimer checking |
| 🔎 Restriction Enzyme Analysis | Restriction site mapping integrated with REBASE database |
| 🧮 Molecular Calculators | DNA/RNA/protein tools including MW calculator, codon usage, and sequence converter |
- Go to Releases
- Download
BioXAK-v1.0.zip - Extract the ZIP file to any folder
- Double-click
BioXAK.exeto launch
Requirements: Windows 10 / 11 (64-bit). No additional installation required.
TCGA preprocessed dataset is available on Zenodo: (DOI to be added)
Download and place the data file in the Data/ folder before launching the TCGA analysis module.
If you use BioXAK in your research, please cite:
(Citation will be added upon publication)
This project is licensed under the MIT License.