kineticmodel

Kinetic models for dynamic PET analysis

Installation

Clone this repository to your machine, then type in terminal: pip install -e PATH_TO/kineticmodel

If you'd like to have wrappers for integration with nipype, use the nipype extra: pip install -e PATH_TO/kineticmodel[nipype]

To-do:

Must-to-have:

• open PET data set to use in examples
• save_results implementation in kineticmodel.py
• speed up SRTM_Lammertsma1996
• add examples for region-wise processing
• add examples for voxel-wise processing
• Additional tests to increase code coverage to 80%
• Improve ReadMe and donwload/install instructions

Nice-to-have:

• implementation of srtm2
• wrapper function for voxelwise image processing
• wrapper function for vertexwise image processing
• nipype integration
• ❔ command line tools
• BIDS integration
• ❓ Incorporate unit handling with a package like pint 🍺, units, numericalunits, or astropy.units