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Bug: samtools downsample_bam uses deprecated INT.FRAC format (samtools 1.22+ incompatible)

Status: Open.

#97 In berntpopp/MucOneUp;

· berntpopp opened on Apr 8, 2026

VNTR downsample mode produces unrealistic coverage: simulation architecture doesn't generate flanking reads

Status: Open.

#88 In berntpopp/MucOneUp;

· berntpopp opened on Apr 6, 2026

Feature: Evaluate GENOMICON-Seq for realistic PCR duplicate simulation

enhancementNew feature or requestNew feature or request

Status: Open.

#52 In berntpopp/MucOneUp;

· berntpopp opened on Nov 23, 2025