Releases: barricklab/efmcalculator2
Releases · barricklab/efmcalculator2
Release list
v2.0.0-beta.3
Updates branding to be consistently efmcalculator2
v2.0.0-beta.2
What's Changed
Initial public version
- Detection for Short Repeated Sequences, noncontinuous repeats less than 16 bases in length
- Rewritten from the ground up
- Pure python for easy local installation
- Improved filtering
- Methods for multi sequence inputs
- Comprehensive CLI
Full Changelog: v2.0.0-beta.1...v2.0.0-beta.2
V2.0.0-beta.1
EFM Calculator Version 2 beta release. Setting a tag for proper dynamic versioning
- Rewritten scanning algorithm using base python and vectorized polars for downstream processing
- Rewritten webapp using Streamlit and Bokeh to provide an up to date interface
- Simple Repeat Sequence prediction for repeats between 5 and 15 base pairs
- Added additional quality of life features like CSV input, multi-file input, and annotation information