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.idea
.idea
 
 
Eichel etal data
Eichel etal data
 
 
Figures
Figures
 
 
Figures_Ballouz
Figures_Ballouz
 
 
Figures_Tomek_correct
Figures_Tomek_correct
 
 
Figures_gtex
Figures_gtex
 
 
Figures_test
Figures_test
 
 
Jameson etal data
Jameson etal data
 
 
OHara_cellml
OHara_cellml
 
 
Pickles
Pickles
 
 
Simulated_data_Tomek_correct
Simulated_data_Tomek_correct
 
 
Tomek_cellml
Tomek_cellml
 
 
Tomek_fixed_cellml
Tomek_fixed_cellml
 
 
.DS_Store
.DS_Store
 
 
.gitattributes
.gitattributes
 
 
.gitignore
.gitignore
 
 
GTEx_converted_below_1.png
GTEx_converted_below_1.png
 
 
QQ_GTEx.png
QQ_GTEx.png
 
 
README.md
README.md
 
 
alphas_as_function_of_sigmas.png
alphas_as_function_of_sigmas.png
 
 
contour_bivariate_decimal.png
contour_bivariate_decimal.png
 
 
contour_bivariate_decimal_scaled.png
contour_bivariate_decimal_scaled.png
 
 
contour_bivariate_log.png
contour_bivariate_log.png
 
 
contour_bivariate_log_scaled.png
contour_bivariate_log_scaled.png
 
 
correlation_GTEx.png
correlation_GTEx.png
 
 
correlation_GTEx_log.png
correlation_GTEx_log.png
 
 
correlation_GTEx_log2.png
correlation_GTEx_log2.png
 
 
correlation_scaled_GTEx.png
correlation_scaled_GTEx.png
 
 
gtex_rhythmonome_genes.csv
gtex_rhythmonome_genes.csv
 
 
gtex_rhythmonome_genes_high_RIN.csv
gtex_rhythmonome_genes_high_RIN.csv
 
 
lambdas_as_function_of_sigmas.png
lambdas_as_function_of_sigmas.png
 
 
mass_action_dimers_6_subsets.py
mass_action_dimers_6_subsets.py
 
 
plot_biomarker_stats.py
plot_biomarker_stats.py
 
 
plot_simulation_outputs.py
plot_simulation_outputs.py
 
 
read_gtex.py
read_gtex.py
 
 
read_gtex_all_rhythmonome.py
read_gtex_all_rhythmonome.py
 
 
read_single_cell_data.py
read_single_cell_data.py
 
 
rhythmonome_gtex_vs_single_cells.py
rhythmonome_gtex_vs_single_cells.py
 
 
sampled_from_bivariate_decimal.png
sampled_from_bivariate_decimal.png
 
 
sampled_from_bivariate_log.png
sampled_from_bivariate_log.png
 
 
sampled_from_bivariate_zeromean_decimal.png
sampled_from_bivariate_zeromean_decimal.png
 
 
sampled_from_bivariate_zeromean_log.png
sampled_from_bivariate_zeromean_log.png
 
 
sampled_from_bivariate_zeromean_scaled_decimal.png
sampled_from_bivariate_zeromean_scaled_decimal.png
 
 
sampled_from_bivariate_zeromean_sclaed_log.png
sampled_from_bivariate_zeromean_sclaed_log.png
 
 
setup.py
setup.py
 
 
simulation_study_correct_model.py
simulation_study_correct_model.py
 
 
simulation_study_subset_variation.py
simulation_study_subset_variation.py
 
 
simulation_study_with_transformed_samples.py
simulation_study_with_transformed_samples.py
 
 
try_mass_action_symbolic.py
try_mass_action_symbolic.py
 
 
try_miokit_simulation.py
try_miokit_simulation.py
 
 

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Work in progress: using mass action kinetics to explaing the buffering effect ion channel coexpression may have on elecrical stability in cardiomyocytes.

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Simulation study of the effects of ion channel coexpressionon the boundary.

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