Update dependency rocker-org/rocker-versioned2 to v4.6.1

[renovate]

This PR contains the following updates:

Package	Update	Change
rocker-org/rocker-versioned2	minor	4.2.3 → 4.6.1

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Release Notes

rocker-org/rocker-versioned2 (rocker-org/rocker-versioned2)

v4.6.1

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What's Changed

• Automatic update of container definition files by @​github-actions[bot] in #​1004
• Automatic update of container definition files by @​github-actions[bot] in #​1005
• Automatic update of container definition files by @​github-actions[bot] in #​1009
• build(deps): bump ghcr.io/devcontainers/features/docker-in-docker from 2.17.0 to 3.0.1 by @​dependabot[bot] in #​1008
• Automatic update of container definition files by @​github-actions[bot] in #​1010
• Automatic update of container definition files by @​github-actions[bot] in #​1011
• build(deps): bump actions/checkout from 6 to 7 by @​dependabot[bot] in #​1013
• Automatic update of container definition files by @​github-actions[bot] in #​1014

Full Changelog: rocker-org/rocker-versioned2@R4.6.0...R4.6.1

v4.6.0

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What's Changed

• feat: enable linux/arm64 builds for rocker/geospatial by @​cboettig in #​989
• Automatic update of container definition files by @​github-actions[bot] in #​992
• init_userconf.sh: only add line to /etc/sudoers once by @​zhoualbert in #​996
• Automatic update of container definition files by @​github-actions[bot] in #​997
• Automatic update of container definition files by @​github-actions[bot] in #​998
• Automatic update of container definition files by @​github-actions[bot] in #​999
• add libuv1-dev for fs package system dependency by @​cboettig in #​1000
• Automatic update of container definition files by @​github-actions[bot] in #​1002
• Automatic update of container definition files by @​github-actions[bot] in #​1003

New Contributors

• @​zhoualbert made their first contribution in #​996

Full Changelog: rocker-org/rocker-versioned2@R4.5.3...R4.6.0

v4.5.3

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What's Changed

• build: fix r version parsing by @​eitsupi in #​961
• Automatic update of container definition files by @​github-actions[bot] in #​962
• build(deps): bump actions/checkout from 5 to 6 by @​dependabot[bot] in #​963
• Automatic update of container definition files by @​github-actions[bot] in #​964
• build(deps): bump peter-evans/create-pull-request from 7 to 8 by @​dependabot[bot] in #​965
• build(deps): bump actions/upload-artifact from 5 to 6 by @​dependabot[bot] in #​967
• build(deps): bump actions/download-artifact from 6 to 7 by @​dependabot[bot] in #​968
• Automatic update of container definition files by @​github-actions[bot] in #​970
• Automatic update of container definition files by @​github-actions[bot] in #​972
• ci(wiki): fs::fs_path can't be treated as character by @​eitsupi in #​977
• build(deps): bump actions/upload-artifact from 6 to 7 by @​dependabot[bot] in #​980
• build(deps): bump actions/download-artifact from 7 to 8 by @​dependabot[bot] in #​981
• build(deps): bump docker/setup-qemu-action from 3 to 4 by @​dependabot[bot] in #​984
• build(deps): bump docker/login-action from 3 to 4 by @​dependabot[bot] in #​983
• build(deps): bump crazy-max/ghaction-github-runtime from 3 to 4 by @​dependabot[bot] in #​982
• build(scripts/generate-variables): switch the source of ubuntu version file by @​eitsupi in #​986
• Automatic update of container definition files by @​github-actions[bot] in #​987
• build(deps): bump docker/setup-buildx-action from 3 to 4 by @​dependabot[bot] in #​988
• Automatic update of container definition files by @​github-actions[bot] in #​991

Full Changelog: rocker-org/rocker-versioned2@R4.5.2...R4.5.3

v4.5.2

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What's Changed

• refactor!: remove extra (rocker/binder) related files by @​eitsupi in #​932
• Automatic update of container definition files by @​github-actions[bot] in #​933
• Automatic update of container definition files by @​github-actions[bot] in #​936
• Automatic update of container definition files by @​github-actions[bot] in #​937
• build(deps): bump actions/download-artifact from 4 to 5 by @​dependabot[bot] in #​940
• build(deps): bump actions/checkout from 4 to 5 by @​dependabot[bot] in #​941
• Automatic update of container definition files by @​github-actions[bot] in #​943
• Automatic update of container definition files by @​github-actions[bot] in #​946
• Automatic update of container definition files by @​github-actions[bot] in #​947
• Automatic update of container definition files by @​github-actions[bot] in #​948
• chore: Enable P3M binary R package installation on arm64 platform by @​eitsupi in #​949
• Automatic update of container definition files by @​github-actions[bot] in #​952
• Automatic update of container definition files by @​github-actions[bot] in #​953
• build(deps): bump stefanzweifel/git-auto-commit-action from 6 to 7 by @​dependabot[bot] in #​954
• build(deps): bump actions/upload-artifact from 4 to 5 by @​dependabot[bot] in #​956
• build(deps): bump actions/download-artifact from 5 to 6 by @​dependabot[bot] in #​957
• Automatic update of container definition files by @​github-actions[bot] in #​958
• Automatic update of container definition files by @​github-actions[bot] in #​959

Full Changelog: rocker-org/rocker-versioned2@R4.5.1...R4.5.2

v4.5.1

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What's Changed

• Automatic update of container definition files by @​github-actions in #​924
• Automatic update of container definition files by @​github-actions in #​925
• docs: fix dead link by @​mvillasante in #​927
• Automatic update of container definition files by @​github-actions in #​928
• Automatic update of container definition files by @​github-actions in #​929
• build(deps): bump stefanzweifel/git-auto-commit-action from 5 to 6 by @​dependabot in #​930
• Automatic update of container definition files by @​github-actions in #​931

New Contributors

• @​mvillasante made their first contribution in #​927

Full Changelog: rocker-org/rocker-versioned2@R4.5.0...R4.5.1

v4.5.0

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What's Changed

• Automatic update of container definition files by @​github-actions in #​912
• Automatic update of container definition files by @​github-actions in #​913
• fix(install_quarto.sh): release option works by @​banfai in #​917
• Automatic update of container definition files by @​github-actions in #​919
• Automatic update of container definition files by @​github-actions in #​921

New Contributors

• @​banfai made their first contribution in #​917

Full Changelog: rocker-org/rocker-versioned2@R4.4.3...R4.5.0

v4.4.3

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What's Changed

• Automatic update of container definition files by @​github-actions in #​870
• Automatic update of container definition files by @​github-actions in #​873
• Tweak script description by @​salim-b in #​872
• fix: remove non-root user from the base library/ubuntu image by @​eitsupi in #​874
• Automatic update of container definition files by @​github-actions in #​878
• Automatic update of container definition files by @​github-actions in #​890
• Update install_verse.sh approach to dummy texlive install by @​nickforr in #​886
• refactor!: remove the feature to change the default non-root user name via USER env var by @​eitsupi in #​891
• Automatic update of container definition files by @​github-actions in #​896
• ci: upgrade actions/upload-artifact and actions/download-artifact to v4 by @​eitsupi in #​897
• fix(setup_R): libzstd-dev is needed to install littler with R-devel by @​eitsupi in #​900
• fix(install_tidyverse): xz is needed for source installation of duckdb by @​eitsupi in #​899
• refactor!: remove files for rocker/cuda, rocker/ml, and rocker/ml-verse by @​eitsupi in #​905
• fix path to download latest shiny-server by @​stibemueller in #​906
• Automatic update of container definition files by @​github-actions in #​907
• Automatic update of container definition files by @​github-actions in #​908
• Automatic update of container definition files by @​github-actions in #​911

New Contributors

• @​nickforr made their first contribution in #​886
• @​stibemueller made their first contribution in #​906

Full Changelog: rocker-org/rocker-versioned2@R4.4.2...R4.4.3

v4.4.2

Compare Source

What's Changed

• Automatic update of container definition files by @​github-actions in #​831
• fix: use gdebi-core to install RStudio by @​eitsupi in #​805
• build: ensure only two minor versions (remove R 4.2.3 files) by @​eitsupi in #​839
• ci: fix devel rocker/tidyverse and rocker/verse's platform by @​eitsupi in #​841
• Automatic update of container definition files by @​github-actions in #​845
• turn off for rocker/verse devel build that is currently failing by @​cboettig in #​848
• build(deps): bump peter-evans/create-pull-request from 6 to 7 by @​dependabot in #​850
• Automatic update of container definition files by @​github-actions in #​852
• Automatic update of container definition files by @​github-actions in #​856
• ci: fix cache for rocker/rstudio:devel and rocker/tidyverse:devel by @​eitsupi in #​858
• ci: fix copy errors by @​eitsupi in #​859
• Automatic update of container definition files by @​github-actions in #​862
• refactor: remove workaround for old RStudio Sever by @​eitsupi in #​863
• Revert "refactor: remove workaround for old RStudio Sever" by @​eitsupi in #​864
• Automatic update of container definition files by @​github-actions in #​865
• Automatic update of container definition files by @​github-actions in #​867
• ci: fix rstudio version detection by @​eitsupi in #​868
• Automatic update of container definition files by @​github-actions in #​869

Full Changelog: rocker-org/rocker-versioned2@R4.4.1...R4.4.2

v4.4.1

Compare Source

What's Changed

• Bump actions/checkout from 4.1.1 to 4.1.4 by @​dependabot in #​789
• BREAKING: repository structure change by @​eitsupi in #​782
• ci(wiki): skip uploading wiki artifact in the default branch to speed up the action by @​eitsupi in #​792
• ci: fix to use caches in the building devel images jobs by @​eitsupi in #​794
• build(deps): bump docker/setup-qemu-action from 2 to 3 by @​dependabot in #​793
• Automatic update of container definition files by @​github-actions in #​795
• fix(dockerfiles): ensure copy neccesarry scripts by @​eitsupi in #​796
• fix: this script is needed for run install_rstudio.sh by @​eitsupi in #​797
• fix: this script is needed for run install_shiny_server.sh by @​eitsupi in #​798
• ci: fix condition type by @​eitsupi in #​799
• ci: should update the wiki after experimental images are built by @​eitsupi in #​801
• fix(dockerfile): re add the LANG environment variable by @​eitsupi in #​802
• ci: automatically use the latest tag for install R regression tests by @​eitsupi in #​803
• ci: fix caching of daily devel builds by @​eitsupi in #​804
• ci: fix GHA definition for building extra images by @​eitsupi in #​807
• build: fix duplicated group names by @​eitsupi in #​808
• build: fix for bake group contains - by @​eitsupi in #​809
• fix: fix tag of rocker/ml by @​eitsupi in #​810
• fix: fix shiny server's port by @​eitsupi in #​812
• ci: need more space for this workflow by @​eitsupi in #​813
• Automatic update of container definition files by @​github-actions in #​815
• build: use the r-dependent-package devcontainer Feature by @​eitsupi in #​817
• Automatic update of container definition files by @​github-actions in #​819
• Automatic update of container definition files by @​github-actions in #​824
• Automatic update of container definition files by @​github-actions in #​825
• Automatic update of container definition files by @​github-actions in #​828
• Automatic update of container definition files by @​github-actions in #​829

Full Changelog: rocker-org/rocker-versioned2@R4.4.0...R4.4.1

v4.4.0

Compare Source

What's Changed

• Automatic update of container definition files by @​github-actions in #​766
• fix #​763 by @​Hua-Zhou in #​765
• Ensure SIGTERM leads to graceful termination in rocker/binder by @​consideRatio in #​773
• Automatic update of container definition files by @​github-actions in #​778
• docs(wiki): split the image table to current and past by @​eitsupi in #​780
• Bump docker/setup-buildx-action from 2 to 3 by @​dependabot in #​697
• Bump docker/login-action from 2 to 3 by @​dependabot in #​699
• Bump docker/setup-qemu-action from 2 to 3 by @​dependabot in #​698
• Bump stefanzweifel/git-auto-commit-action from 4 to 5 by @​dependabot in #​711
• Bump peter-evans/create-pull-request from 5 to 6 by @​dependabot in #​783
• Bump github/super-linter from 5 to 6 by @​dependabot in #​786
• ci: pin the actions/checkout version to avoid libgit2's incompatibility by @​eitsupi in #​787
• Automatic update of container definition files by @​github-actions in #​788

New Contributors

• @​Hua-Zhou made their first contribution in #​765
• @​consideRatio made their first contribution in #​773

Full Changelog: rocker-org/rocker-versioned2@R4.3.3...R4.4.0

v4.3.3

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What's Changed

• Document R dependencies of make setup by @​yuvipanda in #​719
• Updated OSGeo recipes by @​cboettig in #​708
• Update tex packages needed for knitting Rmd files to PDF by @​yuvipanda in #​721
• [CI] Fix and refactor the script to auto update definition files by @​eitsupi in #​722
• Automatic update of container definition files by @​github-actions in #​723
• Automatic update of container definition files by @​github-actions in #​727
• Automatic update of container definition files by @​github-actions in #​729
• Automatic update of container definition files by @​github-actions in #​734
• Automatic update of container definition files by @​github-actions in #​735
• Automatic update of container definition files by @​github-actions in #​737
• Install python into a venv by @​yuvipanda in #​718
• Automatic update of container definition files by @​github-actions in #​738
• Manually set PATH and VIRTUAL_ENV for all binder related files by @​yuvipanda in #​740
• Automatic update of container definition files by @​github-actions in #​744
• Add tlmgr packages needed for quarto to knit to PDF by @​yuvipanda in #​741
• fix: add libxt6 by @​dpprdan in #​748
• Patch cuda dev tools (#​736) by @​cboettig in #​743
• fix: the flag of purge build deps by @​eitsupi in #​751
• fix: the flag of purge build deps by @​eitsupi in #​753
• install texlive conditionally by @​cboettig in #​750
• hotfix on path order by @​cboettig in #​758
• Automatic update of container definition files by @​github-actions in #​762
• Automatic update of container definition files by @​github-actions in #​764

Full Changelog: rocker-org/rocker-versioned2@R4.3.2...R4.3.3

v4.3.2

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What's Changed

• fix: rstudio redirect links use focal now by @​eitsupi in #​669
• Install JupyterHub as part of install_jupyter.sh by @​yuvipanda in #​668
• Automatic update of container definition files by @​github-actions in #​673
• Automatic update of container definition files by @​github-actions in #​675
• Automatic update of container definition files by @​github-actions in #​678
• add hdf5/hdf4 to dev_osgeo script by @​mdsumner in #​685
• Fix installation of littler for R devel by @​eitsupi in #​688
• Update install_dev_osgeo.sh by @​cboettig in #​689
• Automatic update of container definition files by @​github-actions in #​690
• Automatic update of container definition files by @​github-actions in #​693
• Bump actions/checkout from 3 to 4 by @​dependabot in #​694
• Add sfarrow to install_geospatial.sh by @​ranchodeluxe in #​692
• Bump crazy-max/ghaction-github-runtime from 2 to 3 by @​dependabot in #​696
• Automatic update of container definition files by @​github-actions in #​700
• Automatic update of container definition files by @​github-actions in #​706
• binder: Install packages required for Jupyter to PDF convert by @​yuvipanda in #​714
• Automatic update of container definition files by @​github-actions in #​716
• Check if auth-minimum-user-id is already set to zero on rootless by @​zeehio in #​709
• Automatic update of container definition files by @​github-actions in #​717

New Contributors

• @​mdsumner made their first contribution in #​685
• @​ranchodeluxe made their first contribution in #​692

Full Changelog: rocker-org/rocker-versioned2@R4.3.1...R4.3.2

v4.3.1

Compare Source

What's Changed

• Automatic update of container definition files by @​github-actions in #​639
• ci(reports): fix report rename mechanism by @​eitsupi in #​642
• Revert "Allow building rocker/rstudio:latest-daily on linux/arm64 platform with skipping install quarto CLI (#​578)" by @​eitsupi in #​646
• Automatic update of container definition files by @​github-actions in #​649
• Better support for rootless containers by @​zeehio in #​636
• Automatic update of container definition files by @​github-actions in #​650
• enable arm64 build for rocker/rstudio after RStudio IDE 2023.05.0 by @​eitsupi in #​651
• Automatic update of container definition files by @​github-actions in #​656
• Only switch to libblas on focal by @​eitsupi in #​657
• Automatic update of container definition files by @​github-actions in #​660
• [CI] More reliable RStudio version capture by @​eitsupi in #​666
• Automatic update of container definition files by @​github-actions in #​667

New Contributors

• @​zeehio made their first contribution in #​636

Full Changelog: rocker-org/rocker-versioned2@R4.3.0...R4.3.1

v4.3.0

Compare Source

What's Changed

• ci(reports): should ignore unknown/unknown platform rows by @​eitsupi in #​616
• Automatic update of container definition files by @​github-actions in #​617
• [CI] Using latest dplyr in CI jobs again by @​eitsupi in #​623
• Install cmake on install_wgrib2.sh to build wgrib2 by @​eitsupi in #​622
• reflects the upstream install2.r script updates by @​eitsupi in #​625
• Use jupyter lab instead of jupyter notebook as default command of rocker/binder by @​eitsupi in #​628
• [CI] Reduce building images (supporting R versions) by @​eitsupi in #​624
• Bump peter-evans/create-pull-request from 4 to 5 by @​dependabot in #​630
• Bump github/super-linter from 4 to 5 by @​dependabot in #​632
• add geoparquet/arrow drivers for GDAL by @​cboettig in #​633
• Automatic update of container definition files by @​github-actions in #​635

Full Changelog: rocker-org/rocker-versioned2@R4.2.3...R4.3.0

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