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Minimum viability analysis - I successfully produced a Bayesian analysis, maximum likelihood, and iqtree from the Viburnum data. Currently working on the comparative portion of the project, but having trouble with matrices.
Added info about the methods that I have been using
Altered the bayesian tree from .nexus format to .newick format by reexporting through figtree.
edited formatting
New script that I started writing that should be able to find the difference in evolutionary rate. Currently uses OU, but I plan to add lines to compare different models
updated r script to work with real data and phylogeny this is the data that I pulled from old Edwards' lab stuff/papers
Added ancestral trait estimation for traits that were complete for all species, H species, and water potential species
csv versions of the files
threshold model and fixed ancestral state reconstruction
All of the plots that I have made
phylomorphospace plots and updated data files
Forgot to upload the pca and scree plots
chromosome data and integration with syzygium project
tree with additional h and i cell lineages
phylogenetic shift and correlogram work, also leaf angle
plot images from pca comparasions
new files for pca comparison between the two groups
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