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Updates the requirements on Documenter, Optimization, ComponentArrays, Lux, DiffEqFlux, OrdinaryDiffEq, Plots, DataCollocations, Zygote, OptimizationOptimisers, PreallocationTools and SciMLSensitivity to permit the latest version.
Updates Documenter to 1.17.0

Release notes

Sourced from Documenter's releases.

v1.17.0

Added

  • The version selector now also preserves the anchor (hash) when switching between documentation versions. Additionally, the outdated/dev version warning banner now also tries to keep you on the same page (and position) when linking to the latest stable release. (#2880)
  • Added Remotes.Forgejo for specifying a Remote hosted on a Forgejo instance (such as codeberg.org). (#2857)
  • Doctests now default to the parser_for_module of the module that the docstring appears in, allowing modules that set their syntax version via Base.Experimental.@set_syntax_version to have their doctests parsed with the correct syntax automatically. Also added support for DocTestSyntax metadata and per-block syntax= attributes to explicitly specify a syntax version. (#2874)
  • Added a show_log keyword for Documenter.LaTeX to print LaTeX compiler logs to stdout when PDF compilation fails, and support for forcing this via DOCUMENTER_LATEX_SHOW_LOGS in CI environments. (#1697)
  • Added support for new features of the Markdown stdlib introduced in Julia 1.14, namely strike through, HTML blocks and inline HTML (this requires Julia 1.14+ and MarkdownAST 0.1.3).

Changed

  • reduced time complexity from O(n^2) to O(n) to improve the initial load time for search (#2875)
  • Git no longer displays a message about the default branch name when calling deploydocs(). (#2854)
  • Don't escape characters (such as ~) in URLs when writing LaTeX. (#2210)
  • Tweak the layout of the table of contents in LaTeX / PDF output so that for a document with 8 or more parts, the part number (VIII) does not overlap with the part title. (#2871)

Fixed

  • Fixed rendering of operator docstring bindings such as Base.:(:) and Base.:(==) in doc headers and indices. (#2844)

The changes are documented in the CHANGELOG.md file.

Diff since v1.16.1

Changelog

Sourced from Documenter's changelog.

Version [v1.17.0] - 2026-02-20

Added

  • The version selector now also preserves the anchor (hash) when switching between documentation versions. Additionally, the outdated/dev version warning banner now also tries to keep you on the same page (and position) when linking to the latest stable release. (#2880)
  • Added Remotes.Forgejo for specifying a Remote hosted on a Forgejo instance (such as codeberg.org). (#2857)
  • Doctests now default to the parser_for_module of the module that the docstring appears in, allowing modules that set their syntax version via Base.Experimental.@set_syntax_version to have their doctests parsed with the correct syntax automatically. Also added support for DocTestSyntax metadata and per-block syntax= attributes to explicitly specify a syntax version. (#2874)
  • Added a show_log keyword for Documenter.LaTeX to print LaTeX compiler logs to stdout when PDF compilation fails, and support for forcing this via DOCUMENTER_LATEX_SHOW_LOGS in CI environments. (#1697)
  • Added support for new features of the Markdown stdlib introduced in Julia 1.14, namely strike through, HTML blocks and inline HTML (this requires Julia 1.14+ and MarkdownAST 0.1.3).

Changed

  • reduced time complexity from O(n^2) to O(n) to improve the initial load time for search (#2875)
  • Git no longer displays a message about the default branch name when calling deploydocs(). (#2854)
  • Don't escape characters (such as ~) in URLs when writing LaTeX. (#2210)
  • Tweak the layout of the table of contents in LaTeX / PDF output so that for a document with 8 or more parts, the part number (VIII) does not overlap with the part title. (#2871)

Fixed

  • During cross-referencing find_object correctly locates the Documenter.Object associated with UnionAll method signatures. (#2836, #2889)
  • Fixed rendering of operator docstring bindings such as Base.:(:) and Base.:(==) in doc headers and indices. (#2844)

Version [v1.16.1] - 2025-11-21

Fixed

  • The -g is now passed to curl when checking links, to disable globbing, which could cause undesirable behavior when checking links containing characters like for example [, {, & or ?. (#2839, #2842)
  • Fixed insufficient paragraph spacing in HTML output for @docs blocks. ([#2845, #2847])
  • Don't expand details admonition by default. ([#2846, #2847])
  • Removed superfluous vertical space at end of @docs blocks. (#2849)

Version [v1.16.0] - 2025-11-14

Added

  • Added option treat_markdown_warnings_as_error which throws an error when encountering a markdown/interpolation warning (#2792, #2751)
  • Footnotes can now be previewed by hovering over the link. (#2080)
  • The version selector now attempts to stay on the same page when switching between documentation versions. If the page doesn't exist in the target version, it falls back to the version homepage. (#2801)
  • Allow named @eval blocks: such a block shares its execution context with all other @eval, @example, @repl and @setup blocks on the same page which use the same name. (#2074, #2812)

Changed

  • Page category is removed from the search index and now everything is in section category. (#2762, #2413)
  • Changed the docstring block accordions from a custom implementation to HTML details+summary tag. (#2772, #2773)
  • Improved the search tokenizer and custom trimmer to improve search results. (#1457, #2114, #2744)
  • Improved several warning/error messages to (more accurately) report the location (filename, line range) in which the warning/error originated. (#2426, #2752, #2793, #2803, #2809)
  • Warn/error if jldoctest starts with an empty line; or lacks empty line between two REPL prompts. (#2031, #2083, #2679, #2808)
  • The forcepush=true option to deploydocs now uses --force-with-lease instead of --force. (#2817)
  • Improved the generation of anchors for admonitions in HTML output to be more stable and e.g. not change due to changes of the internal representation across different Julia versions. (#2710)

... (truncated)

Commits

Updates Optimization to 5.6.2

Changelog

Sourced from Optimization's changelog.

v4 Breaking changes

  1. The main change in this breaking release has been the way mini-batching is handled. The data argument in the solve call and the implicit iteration of that in the callback has been removed, the stochastic solvers (Optimisers.jl and Sophia) now handle it explicitly. You would now pass in a DataLoader to OptimizationProblem as the second argument to the objective etc (p) if you want to do minibatching, else for full batch just pass in the full data.

  2. The support for extra returns from objective function has been removed. Now the objective should only return a scalar loss value, hence callback doesn't take extra arguments other than the state and loss value.

Commits

Updates ComponentArrays to 0.15.40

Changelog

Sourced from ComponentArrays's changelog.

ComponentArrays.jl NEWS

Notes on new features (minor releases). For more details on bugfixes and non-feature-adding changes (patch releases), check out the releases page.

v0.15.0

  • Unpack array components as StaticArrays!
julia> x = ComponentArray(a=5, b=[4, 1], c = [1 2; 3 4], d=(e=2, f=[6, 30.0]));
julia> @​static_unpack a, b, c, d = x;
julia> a
5.0
julia> b
2-element SVector{2, Float64} with indices SOneTo(2):
4.0
1.0
julia> c
2×2 SMatrix{2, 2, Float64, 4} with indices SOneTo(2)×SOneTo(2):
1.0  2.0
3.0  4.0
julia> d
ComponentVector{Float64,SubArray...}(e = 2.0, f = [6.0, 30.0])

v0.12.0

  • Multiple symbol indexing!
    • Use either an Array or Tuple of Symbols to extract multiple named components into a new ComponentArray
    • It's fast!
julia> ca = ComponentArray(a=5, b=[4, 1], c=(a=2, b=[6, 30.0]))
ComponentVector{Float64}(a = 5.0, b = [4.0, 1.0], c = (a = 2.0, b = [6.0, 30.0]))
julia> ca[(:c, :a)]
ComponentVector{Float64}(c = (a = 2.0, b = [6.0, 30.0]), a = 5.0)
julia> ca[[:c, :a]] == ca[(:c, :a)]
true
julia> @​view ca[(:c, :a)]
ComponentVector{Float64,SubArray...}(c = (a = 2.0, b = [6.0, 30.0]), a = 5.0)

v0.11.0

  • Calling axes on a ComponentArray returns a new CombinedAxis type!
    • Doing things The Right Way™!
    • No more complicated and error-prone custom broadcasting machinery!
    • No more weird special cases!

v0.10.0

... (truncated)

Commits

Updates Lux to 1.31.4

Release notes

Sourced from Lux's releases.

v1.31.4

Lux v1.31.4

Diff since v1.31.3

Merged pull requests:

Closed issues:

  • Irregular RAM usage under large amount of epochs on gpu (#872)
  • Memory leak in Dense layer with CUDA (#1230)
  • Reactant compilation for ConvolutionalVAE broken (#1673)
  • [MLDataDevices] error when moving arrays to AMDGPU (#1676)
  • Mooncake is completely busted in recent versions (#1679)
  • Attention assumes 2D mask when using Reactant (#1681)
  • Possible double activation in LuxLib.Impl.cublasLt_fused_dense! (#1684)
  • Documentation build is broken (#1686)
Commits
  • 82b8efe feat: allow new CUDA versions (#1694)
  • 44e712c chore: bump crate-ci/typos from 1.44.0 to 1.45.0 (#1692)
  • a7b5548 fix: host memory leak in cublaslt implementation (#1689)
  • d37e341 fix: correct double activation in cublasLt_fused_dense! generic fallback (#...
  • d8142f3 chore: automatic JuliaFormatter.jl run (#1688)
  • aa76d72 chore: bump version from 1.15.4 to 1.15.5
  • 4b56a44 docs: add missing mooncake_gradient_function docstring to LuxTestUtils API ...
  • d23e02f fix: N-dimensional mask and bias support in ReactantExt MultiHeadAttention (#...
  • a1b6ee8 test: reenable mooncake testing for training api (#1683)
  • c557cb5 feat: Mooncake for LuxTestUtils, LuxLib, Lux general testing, current...
  • Additional commits viewable in compare view

Updates DiffEqFlux to 4.8.0

Commits

Updates OrdinaryDiffEq to 7.1.0

Changelog

Sourced from OrdinaryDiffEq's changelog.

OrdinaryDiffEq.jl v7 / DifferentialEquations.jl v8 Breaking Changes

This release bumps to SciMLBase v3, RecursiveArrayTools v4, and includes breaking changes across DiffEqBase, OrdinaryDiffEqCore, and all solver sublibraries. It also coincides with the DifferentialEquations.jl v8 umbrella release, which is itself a breaking change to the user-facing meta-package.

DifferentialEquations.jl v8: scope reduction

DifferentialEquations.jl v8 no longer re-exports the full SciML solver suite. Previously, using DifferentialEquations pulled in OrdinaryDiffEq, StochasticDiffEq, DelayDiffEq, BoundaryValueDiffEq, Sundials, JumpProcesses, SteadyStateDiffEq, LinearSolve, NonlinearSolve, Optimization, etc. — a large default surface that drove up using time and made it unclear which package any given solver actually came from.

In v8, using DifferentialEquations only loads OrdinaryDiffEq. All other solver families have been removed from the umbrella. If your code relied on DifferentialEquations for SDEs, DDEs, BVPs, jumps, steady states, or any non-ODE solver, you will need to add the topic-specific package to your project explicitly.

Migration

Find the topic you need a solver for and add the corresponding sublib(s) directly. The DiffEqDocs tutorials and solver pages now specify, per algorithm, which package it ships from. Common cases:

Topic Old (DiffEq v7 umbrella) New (DiffEq v8)
ODEs using DifferentialEquations using OrdinaryDiffEq (or using OrdinaryDiffEqTsit5, OrdinaryDiffEqRosenbrock, … for individual solver families)
Stochastic ODEs using DifferentialEquations using StochasticDiffEq
Delay ODEs using DifferentialEquations using DelayDiffEq
Boundary value problems using DifferentialEquations using BoundaryValueDiffEq (or one of BoundaryValueDiffEqMIRK, BoundaryValueDiffEqFIRK, BoundaryValueDiffEqShooting, …)
Jump processes using DifferentialEquations using JumpProcesses
Steady state using DifferentialEquations using SteadyStateDiffEq
DAEs (mass matrix or implicit) using DifferentialEquations using OrdinaryDiffEq (mass matrix), using Sundials (IDA), or topic sublib
Sundials wrappers (CVODE, IDA, ARKODE) using DifferentialEquations using Sundials
Linear / nonlinear / optimization using DifferentialEquations using LinearSolve / using NonlinearSolve / using Optimization

For ODE work specifically, prefer importing only the sublib you need (e.g. using OrdinaryDiffEqTsit5: Tsit5) rather than the umbrella using OrdinaryDiffEq — the v7 ecosystem split lets you trim using time substantially. The DiffEqDocs tutorials and solver index annotate every algorithm with its host sublib.

Why

Removing the meta-package's broad re-exports lets each topic's package version cycle independently, eliminates the long using DifferentialEquations precompile chain for users who only need ODEs, and makes the dependency graph for any given script honest about what's actually being loaded.

This change is independent of the OrdinaryDiffEq v7 changes below — OrdinaryDiffEq v7 ships with DifferentialEquations v8, but you can also use OrdinaryDiffEq v7 directly without the umbrella package at all.

OrdinaryDiffEq.jl v7 Breaking Changes

This release bumps to SciMLBase v3, RecursiveArrayTools v4, and includes breaking changes across DiffEqBase, OrdinaryDiffEqCore, and all solver sublibraries.

Themes of the v7 release

Most of the breaking changes fall into a small set of recurring themes. Keep these in mind while reading the migration table — they explain why an individual change exists and often suggest the right migration direction:

  • Time to first solve (TTFS) reduction. Direct deps on Static.jl, StaticArrayInterface.jl, Polyester.jl, and StaticArrays.jl were dropped; using OrdinaryDiffEq now loads only the default solver set; ODEFunction switched to AutoSpecialize. All of this means less code loaded and more precompilation caching on first solve.

  • Type stability everywhere. All Bool solver/solve keyword arguments (autodiff, verbose, alias, lazy, …) were replaced by typed objects. Passing a Bool no longer changes dispatch in ways the compiler cannot specialize on, and the reverse is no longer allowed to silently fall back through slow generic paths. For example:

    # v6 — a Bool
Rosenbrock23(autodiff = true)
solve(prob, alg; verbose = false, alias = true)

... (truncated)

Commits

Updates Plots to 1.41.6

Release notes

Sourced from Plots's releases.

Plots-v1.41.6

What's Changed

Full Changelog: JuliaPlots/Plots.jl@Plots-v1.41.5+docs...Plots-v1.41.6

Changelog

Sourced from Plots's changelog.

Plots.jl NEWS

Unreleased

Features

  • GR backend: Add support for colorbar_ticks to customize tick positions and labels on colorbars (#3560)

Breaking changes

v2

  • deprecated backends pgfplots and pyplot removed
  • deprecated keyword orientation removed
  • backends are extensions now so the backend code must be explicitly loaded using import with the backend package, e.g. 
    using Plots
import GR # loads backend code

  • Types are no longer part of the Plots API this affects
    • Shape, which is now shape
  • The default label is now :none, use :auto to restore the previous behaviour
  • UnitfulExt changes:
    • The P_str macro is no longer provided as API. The intended goal was simply to not put units on axis labels which were "protected strings". To achieve this now, pass unitformat=:nounit.
    • The axis option unitformat=:none, unitformat=nothing, and unitformat=false previously printed the axis guide as string(label, " ", unit). That behavior is now moved to unitformat=:space, and :none, nothing, and false print the axis guide without units.

notes on release changes, ongoing development, and future planned work

NOTE: this file is deprecated, see the TagBot auto-generated changelogs instead

0.28.3

  • support generalized array interface
  • save to pdf, svg and eps in plotlyjs
  • fix for clims in line_z
  • optimize heatmap logic in gr

0.26.3

  • fix vline with dates
  • fix PyPlot logscale bug
  • avoid annotation clipping for PyPlot
  • allow plotting of Any vectors and 3D plotting again in convertToAnyVector
  • specify legend title font in GR and PyPlot

... (truncated)

Commits

Updates DataCollocations to 1.1.0

Commits

Updates Zygote to 0.7.11

Release notes

Sourced from Zygote's releases.

v0.7.11

Zygote v0.7.11

Diff since v0.7.10

Merged pull requests:

... (truncated)

Commits

Updates OptimizationOptimisers to 0.3.17

Commits

Updates PreallocationTools to 1.2.1

Commits

Updates SciMLSensitivity to 7.112.1

Commits

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Bump the all-julia-packages group across 1 directory with 12 updates
eda2937 
Updates the requirements on [Documenter](https://github.com/JuliaDocs/Documenter.jl), [Optimization](https://github.com/SciML/Optimization.jl), [ComponentArrays](https://github.com/SciML/ComponentArrays.jl), [Lux](https://github.com/LuxDL/Lux.jl), [DiffEqFlux](https://github.com/SciML/DiffEqFlux.jl), [OrdinaryDiffEq](https://github.com/SciML/OrdinaryDiffEq.jl), [Plots](https://github.com/JuliaPlots/Plots.jl), [DataCollocations](https://github.com/SciML/DataCollocations.jl), [Zygote](https://github.com/FluxML/Zygote.jl), [OptimizationOptimisers](https://github.com/SciML/Optimization.jl), [PreallocationTools](https://github.com/SciML/PreallocationTools.jl) and [SciMLSensitivity](https://github.com/SciML/SciMLSensitivity.jl) to permit the latest version.

Updates `Documenter` to 1.17.0
- [Release notes](https://github.com/JuliaDocs/Documenter.jl/releases)
- [Changelog](https://github.com/JuliaDocs/Documenter.jl/blob/master/CHANGELOG.md)
- [Commits](JuliaDocs/Documenter.jl@v0.1.0...v1.17.0)

Updates `Optimization` to 5.6.2
- [Release notes](https://github.com/SciML/Optimization.jl/releases)
- [Changelog](https://github.com/SciML/Optimization.jl/blob/master/NEWS.md)
- [Commits](https://github.com/SciML/Optimization.jl/commits)

Updates `ComponentArrays` to 0.15.40
- [Release notes](https://github.com/SciML/ComponentArrays.jl/releases)
- [Changelog](https://github.com/SciML/ComponentArrays.jl/blob/main/NEWS.md)
- [Commits](https://github.com/SciML/ComponentArrays.jl/commits)

Updates `Lux` to 1.31.4
- [Release notes](https://github.com/LuxDL/Lux.jl/releases)
- [Commits](LuxDL/Lux.jl@LuxLib-v0.1.0...v1.31.4)

Updates `DiffEqFlux` to 4.8.0
- [Release notes](https://github.com/SciML/DiffEqFlux.jl/releases)
- [Commits](https://github.com/SciML/DiffEqFlux.jl/commits)

Updates `OrdinaryDiffEq` to 7.1.0
- [Release notes](https://github.com/SciML/OrdinaryDiffEq.jl/releases)
- [Changelog](https://github.com/SciML/OrdinaryDiffEq.jl/blob/master/NEWS.md)
- [Commits](SciML/OrdinaryDiffEq.jl@OrdinaryDiffEqAMF-v1.0.0...v7.1.0)

Updates `Plots` to 1.41.6
- [Release notes](https://github.com/JuliaPlots/Plots.jl/releases)
- [Changelog](https://github.com/JuliaPlots/Plots.jl/blob/v2/NEWS.md)
- [Commits](JuliaPlots/Plots.jl@Plots-v1.41.5+docs...Plots-v1.41.6)

Updates `DataCollocations` to 1.1.0
- [Commits](https://github.com/SciML/DataCollocations.jl/commits)

Updates `Zygote` to 0.7.11
- [Release notes](https://github.com/FluxML/Zygote.jl/releases)
- [Commits](FluxML/Zygote.jl@v0.1.0...v0.7.11)

Updates `OptimizationOptimisers` to 0.3.17
- [Release notes](https://github.com/SciML/Optimization.jl/releases)
- [Changelog](https://github.com/SciML/Optimization.jl/blob/master/NEWS.md)
- [Commits](https://github.com/SciML/Optimization.jl/commits)

Updates `PreallocationTools` to 1.2.1
- [Release notes](https://github.com/SciML/PreallocationTools.jl/releases)
- [Commits](https://github.com/SciML/PreallocationTools.jl/commits)

Updates `SciMLSensitivity` to 7.112.1
- [Release notes](https://github.com/SciML/SciMLSensitivity.jl/releases)
- [Commits](https://github.com/SciML/SciMLSensitivity.jl/commits)

---
updated-dependencies:
- dependency-name: Documenter
  dependency-version: 1.17.0
  dependency-type: direct:production
  dependency-group: all-julia-packages
- dependency-name: Optimization
  dependency-version: 5.6.2
  dependency-type: direct:production
  dependency-group: all-julia-packages
- dependency-name: ComponentArrays
  dependency-version: 0.15.40
  dependency-type: direct:production
  dependency-group: all-julia-packages
- dependency-name: Lux
  dependency-version: 1.31.4
  dependency-type: direct:production
  dependency-group: all-julia-packages
- dependency-name: DiffEqFlux
  dependency-version: 4.8.0
  dependency-type: direct:production
  dependency-group: all-julia-packages
- dependency-name: OrdinaryDiffEq
  dependency-version: 7.1.0
  dependency-type: direct:production
  dependency-group: all-julia-packages
- dependency-name: Plots
  dependency-version: 1.41.6
  dependency-type: direct:production
  dependency-group: all-julia-packages
- dependency-name: DataCollocations
  dependency-version: 1.1.0
  dependency-type: direct:production
  dependency-group: all-julia-packages
- dependency-name: Zygote
  dependency-version: 0.7.11
  dependency-type: direct:production
  dependency-group: all-julia-packages
- dependency-name: OptimizationOptimisers
  dependency-version: 0.3.17
  dependency-type: direct:production
  dependency-group: all-julia-packages
- dependency-name: PreallocationTools
  dependency-version: 1.2.1
  dependency-type: direct:production
  dependency-group: all-julia-packages
- dependency-name: SciMLSensitivity
  dependency-version: 7.112.1
  dependency-type: direct:production
  dependency-group: all-julia-packages
...

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@dependabot dependabot Bot added dependencies Pull requests that update a dependency file julia Pull requests that update julia code labels Jun 24, 2026
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Superseded by #32.

@dependabot dependabot Bot closed this Jun 29, 2026
@dependabot dependabot Bot deleted the dependabot/julia/docs/all-julia-packages-2b20ca1938 branch June 29, 2026 00:13
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