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filter_switchgenes ordering

Status: Open.

#30 In SGDDNB/GeneSwitches;

· moi-taiga opened on May 4, 2026

TODO: Include GH action for checks

enhancementNew feature or requestNew feature or request

Status: Open.

#29 In SGDDNB/GeneSwitches;

· moi-taiga opened on Mar 24, 2026

Binarize_exp() and find_switch_logistic_fastglm() use a lot of RAM

Status: Open.

#28 In SGDDNB/GeneSwitches;

· moi-taiga opened on Mar 2, 2026

plot_timeline_ggplot aesthetics, highlight marker genes.

enhancementNew feature or requestNew feature or request

Status: Open.

#23 In SGDDNB/GeneSwitches;

· moi-taiga opened on Aug 26, 2025

find_switch_logistic_fastglm fails with NA's in Pseudotime.

Status: Open.

#22 In SGDDNB/GeneSwitches;

· moi-taiga opened on Aug 19, 2025

Can we compare gene switch for same trajectory direction between control and mutant samples?

Status: Open.

#15 In SGDDNB/GeneSwitches;

· Mona921 opened on Jul 26, 2023

Issue in reduce_pathways

Status: Open.

#10 In SGDDNB/GeneSwitches;

· EmiFeng opened on Jul 5, 2021

integration with Slingshot

Status: Open.

#7 In SGDDNB/GeneSwitches;

· kstreet13 opened on Apr 26, 2021