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4 changes: 0 additions & 4 deletions .url_check_allowlist.txt
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Expand Up @@ -9,10 +9,6 @@
# Code of Conduct boilerplate
http://geekfeminism.wikia.com/wiki/Conference_anti-harassment/Policy # CODE_OF_CONDUCT.md:305

# Colab refs to notebooks no longer in HowTo/workspace
https://colab.research.google.com/github/PyAutoLabs/HowToFit/blob/2026.5.14.2/notebooks/chapter_1_introduction/tutorial_4_complex_models.ipynb # scripts/chapter_1_introduction/README.md:16
https://colab.research.google.com/github/PyAutoLabs/HowToFit/blob/2026.5.14.2/notebooks/chapter_3_graphical_models/tutorial_4_hierarchical_models.ipynb # scripts/chapter_3_graphical_models/README.md:17

# GitHub refs (workspaces / removed tutorials)
https://github.com/Jammy2211/PyAutoLogo/blob/main/gifs/pyautofit.gif?raw=true # README.md:7
https://github.com/PyAutoLabs/HowToFit/blob/main/scripts/chapter_1_introduction/images/bad_fit.png?raw=true # scripts/chapter_1_introduction/tutorial_4_why_modeling_is_hard.py:452
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2 changes: 1 addition & 1 deletion notebooks/chapter_1_introduction/README.md
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Expand Up @@ -13,6 +13,6 @@ The chapter contains the following tutorials:

- [Tutorial 3: Non Linear Search](https://colab.research.google.com/github/PyAutoLabs/HowToFit/blob/2026.7.6.649/notebooks/chapter_1_introduction/tutorial_3_non_linear_search.ipynb) — Searching non-linear parameter spaces to find the best-fit model.

- [Tutorial 4: Complex Models](https://colab.research.google.com/github/PyAutoLabs/HowToFit/blob/2026.7.6.649/notebooks/chapter_1_introduction/tutorial_4_complex_models.ipynb) — Composing and fitting more complex models in a scalable and extensible way.
- [Tutorial 4: Why Modeling Is Hard](https://colab.research.google.com/github/PyAutoLabs/HowToFit/blob/2026.7.6.649/notebooks/chapter_1_introduction/tutorial_4_why_modeling_is_hard.ipynb) — Why fitting complex models is challenging and how a good scientific approach overcomes common problems.

- [Tutorial 5: Results and Samples](https://colab.research.google.com/github/PyAutoLabs/HowToFit/blob/2026.7.6.649/notebooks/chapter_1_introduction/tutorial_5_results_and_samples.ipynb) — Interpreting model-fit results and using the samples for scientific analysis.
2 changes: 1 addition & 1 deletion notebooks/chapter_3_graphical_models/README.md
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Expand Up @@ -14,6 +14,6 @@ The chapter contains the following tutorials:

- [Tutorial 3: Graphical Benefits](https://colab.research.google.com/github/PyAutoLabs/HowToFit/blob/2026.7.6.649/notebooks/chapter_3_graphical_models/tutorial_3_graphical_benefits.ipynb) — Illustrating the benefits of graphical modeling over fitting individual datasets one-by-one.

- [Tutorial 4: Hierarchical Models](https://colab.research.google.com/github/PyAutoLabs/HowToFit/blob/2026.7.6.649/notebooks/chapter_3_graphical_models/tutorial_4_hierarchical_models.ipynb) — Fitting hierarchical models using the graphical modeling framework.
- [Tutorial 4: Hierarchical Models](https://colab.research.google.com/github/PyAutoLabs/HowToFit/blob/2026.7.6.649/notebooks/chapter_3_graphical_models/tutorial_4_hierachical_models.ipynb) — Fitting hierarchical models using the graphical modeling framework.

- [Tutorial 5: Expectation Propagation](https://colab.research.google.com/github/PyAutoLabs/HowToFit/blob/2026.7.6.649/notebooks/chapter_3_graphical_models/tutorial_5_expectation_propagation.ipynb) — Scaling graphical models up to fit extremely large datasets using Expectation Propagation (EP).
2 changes: 1 addition & 1 deletion scripts/chapter_1_introduction/README.md
Original file line number Diff line number Diff line change
Expand Up @@ -13,6 +13,6 @@ The chapter contains the following tutorials:

- [Tutorial 3: Non Linear Search](https://colab.research.google.com/github/PyAutoLabs/HowToFit/blob/2026.7.6.649/notebooks/chapter_1_introduction/tutorial_3_non_linear_search.ipynb) — Searching non-linear parameter spaces to find the best-fit model.

- [Tutorial 4: Complex Models](https://colab.research.google.com/github/PyAutoLabs/HowToFit/blob/2026.7.6.649/notebooks/chapter_1_introduction/tutorial_4_complex_models.ipynb) — Composing and fitting more complex models in a scalable and extensible way.
- [Tutorial 4: Why Modeling Is Hard](https://colab.research.google.com/github/PyAutoLabs/HowToFit/blob/2026.7.6.649/notebooks/chapter_1_introduction/tutorial_4_why_modeling_is_hard.ipynb) — Why fitting complex models is challenging and how a good scientific approach overcomes common problems.

- [Tutorial 5: Results and Samples](https://colab.research.google.com/github/PyAutoLabs/HowToFit/blob/2026.7.6.649/notebooks/chapter_1_introduction/tutorial_5_results_and_samples.ipynb) — Interpreting model-fit results and using the samples for scientific analysis.
2 changes: 1 addition & 1 deletion scripts/chapter_3_graphical_models/README.md
Original file line number Diff line number Diff line change
Expand Up @@ -14,6 +14,6 @@ The chapter contains the following tutorials:

- [Tutorial 3: Graphical Benefits](https://colab.research.google.com/github/PyAutoLabs/HowToFit/blob/2026.7.6.649/notebooks/chapter_3_graphical_models/tutorial_3_graphical_benefits.ipynb) — Illustrating the benefits of graphical modeling over fitting individual datasets one-by-one.

- [Tutorial 4: Hierarchical Models](https://colab.research.google.com/github/PyAutoLabs/HowToFit/blob/2026.7.6.649/notebooks/chapter_3_graphical_models/tutorial_4_hierarchical_models.ipynb) — Fitting hierarchical models using the graphical modeling framework.
- [Tutorial 4: Hierarchical Models](https://colab.research.google.com/github/PyAutoLabs/HowToFit/blob/2026.7.6.649/notebooks/chapter_3_graphical_models/tutorial_4_hierachical_models.ipynb) — Fitting hierarchical models using the graphical modeling framework.

- [Tutorial 5: Expectation Propagation](https://colab.research.google.com/github/PyAutoLabs/HowToFit/blob/2026.7.6.649/notebooks/chapter_3_graphical_models/tutorial_5_expectation_propagation.ipynb) — Scaling graphical models up to fit extremely large datasets using Expectation Propagation (EP).
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