iMR_gMIS_paper_scripts

Scripts to generate all the results of the paper 'Beyond synthetic lethality in large-scale metabolic and regulatory network models via genetic minimal intervention sets'

Name		Name	Last commit message	Last commit date
Latest commit History 5 Commits
Databases		Databases
Plots		Plots
adaptation		adaptation
02_th_calculation.R		02_th_calculation.R
03_Essentiality_prediction_and_figures.R		03_Essentiality_prediction_and_figures.R
04_suppl_figures.R		04_suppl_figures.R
FormulaParserBoolean.m		FormulaParserBoolean.m
Human-GEM-1.14.0.mat		Human-GEM-1.14.0.mat
README.md		README.md
buildGmatrix_iMRmodel_gMCS.m		buildGmatrix_iMRmodel_gMCS.m
buildGmatrix_iMRmodel_gMIS.m		buildGmatrix_iMRmodel_gMIS.m
calculateGeneMCS.m		calculateGeneMCS.m
calculated_gMCSs_gMIS.xlsx		calculated_gMCSs_gMIS.xlsx
filterGmatrix.m		filterGmatrix.m
main.m		main.m
th_log2TPM_CCLE.txt		th_log2TPM_CCLE.txt

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