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Teras of data and how to speed up calculations on a 2.5 GB plant genome

Status: Open.

#237 In Nextomics/NextDenovo;

· julieaorjuela opened on Jun 15, 2026

Visualisation of Assembly

Status: Open.

#236 In Nextomics/NextDenovo;

· JigarHSheth opened on May 5, 2026

Support for MacOS

Status: Open.

#234 In Nextomics/NextDenovo;

· padpadpadpad opened on Jul 2, 2025

Error obtaining .gfa file with "nextgraph_options = -a 3"

Status: Open.

#233 In Nextomics/NextDenovo;

· eggrandio opened on May 23, 2025

Passing Input Files per Job on Distributed Cluster

Status: Open.

#231 In Nextomics/NextDenovo;

· dmora127 opened on Apr 15, 2025

Add a GFA file alongside default FASTA output

Status: Open.

#228 In Nextomics/NextDenovo;

· joaobilro opened on Mar 24, 2025

NextDenovo stuck in the raw_align phase

Status: Open.

#227 In Nextomics/NextDenovo;

· nasongyan opened on Mar 17, 2025

Help Understanding seed_depth

Status: Open.

#224 In Nextomics/NextDenovo;

· cizydorczyk opened on Jan 27, 2025

Stop at ctg_graph, and no nd.asm.fasta.stat file

Status: Open.

#214 In Nextomics/NextDenovo;

· rubbyai opened on Sep 19, 2024

Timing out on minimap-nd tasks

Status: Open.

#203 In Nextomics/NextDenovo;

· wgallin opened on Apr 1, 2024

For low base quality of sequences

Status: Open.

#202 In Nextomics/NextDenovo;

· YouxinZhao opened on Mar 26, 2024

How to improve the N50 and reduce contigs numbers?

Status: Open.

#200 In Nextomics/NextDenovo;

· cj2jy opened on Mar 14, 2024