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1. demGPU demGPU Public

   A GPU implementation of the discrete element method to predict response to co-attractants of self propelled objects.

   C++ 2 1

2. hierarchical-abcsmc hierarchical-abcsmc Public

   A module built on top of abcsysbio (http://www.theosysbio.bio.ic.ac.uk/resources/abc-sysbio/). To perform approximate Bayesian computation sequential Monte-Carlo on a hierarchical model within the …

   Python 1

3. abcsmc-batch abcsmc-batch Public

   A batch implementation of abcsmc. Your simulation and distance function should be contained in simulation.cpp

   C++

4. alignr alignr Public

   An R package to call a single full length TCR from a 10X genomics single cell RNA sequencing contig annotations JSON file.

   HTML 1

5. dynamicCIN dynamicCIN Public

   c++ source code developments based on models of genomics instability.

   C++

6. aocseq aocseq Public

   aocseq: Software package for the analysis of the activation of cells and their sequencing

   HTML