Implementation of MYNN-EDMF and MYNN-SFC submodules

[joeolson42]

This PR adds the official MYNN-EDMF and MYNN-SFC submodules to MPAS with via manage_externals. Some notes on the implementation are below:

1. The submodules were added simultaneously due to the common package (bl_mynnedmf_in) used for both schemes (following the previous implementations).
2. Two additional packages are added to control the allocation of 10 optional 3d output arrays and 5 tke budget arrays.
3. a new cloudiness option is added to handle the processing of the MYNN-EDMF subgrid clouds analogous to radiation driver in WRF.
4. The implementation was complicated by the earlier implementation of MYNN schemes, so renaming of key modules and subroutines was required to allow both submodules to work as alternatives to the other versions. The other schemes should still work but will hopefully be removed.