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100 Commits
examples
examples
 
 
test_suite
test_suite
 
 
.gitignore
.gitignore
 
 
LICENSE
LICENSE
 
 
LucksLabUtils_config.py
LucksLabUtils_config.py
 
 
NAU.py
NAU.py
 
 
OSU.py
OSU.py
 
 
PAU.py
PAU.py
 
 
PCSU.py
PCSU.py
 
 
R2D2.py
R2D2.py
 
 
README.md
README.md
 
 
SU.py
SU.py
 
 
VIU.py
VIU.py
 
 
analyze_cotrans_SHAPE-Seq.py
analyze_cotrans_SHAPE-Seq.py
 
 
calculate_stats_panel.py
calculate_stats_panel.py
 
 
combine_100x_DG_state_plot_dump.py
combine_100x_DG_state_plot_dump.py
 
 
find_parameters.py
find_parameters.py
 
 
generate_DG_from_dbns.py
generate_DG_from_dbns.py
 
 
generate_KineFold_DG.py
generate_KineFold_DG.py
 
 
generate_KineFold_pairs.py
generate_KineFold_pairs.py
 
 
generate_MFE_movie.py
generate_MFE_movie.py
 
 
generate_VARNA_from_pairs.py
generate_VARNA_from_pairs.py
 
 
generate_unique_struct_min_dist_plots.py
generate_unique_struct_min_dist_plots.py
 
 
make_DG_state_plot.R
make_DG_state_plot.R
 
 
make_DG_state_plot_100x.R
make_DG_state_plot_100x.R
 
 
make_DG_state_plot_100x_EQ_Rep_KineFold_figure.R
make_DG_state_plot_100x_EQ_Rep_KineFold_figure.R
 
 
make_DG_state_plot_100x_EQ_Rep_figure.R
make_DG_state_plot_100x_EQ_Rep_figure.R
 
 
make_DG_state_plot_100x_Rep_KineFold_MFE_figure.R
make_DG_state_plot_100x_Rep_KineFold_MFE_figure.R
 
 
make_DG_state_plot_100x_Rep_MFE_figure.R
make_DG_state_plot_100x_Rep_MFE_figure.R
 
 
make_DG_state_plot_100x_figure.R
make_DG_state_plot_100x_figure.R
 
 
make_SI_sample_size_determination.R
make_SI_sample_size_determination.R
 
 
make_ct_to_PCA_MDS_plots.py
make_ct_to_PCA_MDS_plots.py
 
 
make_first_sampled_subplot_MDS_PCA.py
make_first_sampled_subplot_MDS_PCA.py
 
 
make_horizontal_movies.py
make_horizontal_movies.py
 
 

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R2D2: Reconstructing RNA Dynamics from Data

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Reconstructing RNA Dynamics from Data

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GPL-3.0 license
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v.0.0.2 Latest
May 21, 2020

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