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1. CARBonAra CARBonAra Public

   Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protein entities.

   Jupyter Notebook 49 10

2. PeSTo PeSTo Public

   Geometric deep learning method to predict protein binding interfaces from a protein structure.

   Jupyter Notebook 161 27

3. RISoTTo RISoTTo Public

   Context-aware geometric deep learning for RNA sequence design

   Jupyter Notebook 6

4. PeSTo-Carbs PeSTo-Carbs Public

   Geometric Deep Learning for Prediction of Protein-Carbohydrate Binding Interfaces

   Jupyter Notebook 8 2

5. CLoNe CLoNe Public

   Clustering tool for biomolecular structural ensembles and data in general.

   Jupyter Notebook 10 3

6. MaD MaD Public

   A python tool for integrative modeling using intermediate and low resolution cryo-EM data.

   Python 2 1