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  • University of Calgary

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  1. network-based-candidate-gene-predictor network-based-candidate-gene-predictor Public

    Here is a Python program that's used to predict the function of unknown proteins in PPI networks. This program uses NetworkX to create the graph objects from a PPI network file from the STRING data…

    Python 1

  2. some-stat-simulations-in-R some-stat-simulations-in-R Public

    Just a collection of R codes I wrote for a computational statistic course

    R

  3. cancer-rna-seq cancer-rna-seq Public

    Jupyter Notebook

  4. DeepGreenGO DeepGreenGO Public

    A multilabel protein function prediction model for Viridiplantae (green plants) using Graph Neural Networks with ProtBERT embeddings.

    Python