Skip to content

pass single_variant_ld arg to TabixLD in post_process_hits#232

Open
juhis wants to merge 1 commit into
masterfrom
fix-postprocess-tabixld-arg
Open

pass single_variant_ld arg to TabixLD in post_process_hits#232
juhis wants to merge 1 commit into
masterfrom
fix-postprocess-tabixld-arg

Conversation

@juhis

@juhis juhis commented Jul 7, 2026

Copy link
Copy Markdown
Contributor

TabixLD.init requires single_variant_ld that was missing in post_process_hits.py, causing a runtime TypeError in the postprocessing step. Mirror main.py by adding --tabix-ld-wide-fetch (default keeps narrow single-variant fetch on).

@juhis juhis requested a review from Lipastomies July 7, 2026 14:27
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

1 participant