Add CI and unit tests for Python utilities#242

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philippmuench wants to merge 10 commits into

Commits on Mar 31, 2026

add CI smoke test workflow and status badge
philippmuench
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trigger CI on add_tests branch
philippmuench
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split CI into smoke test and unit test workflows with separate badges
philippmuench
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improve README with quick start, parameters, and project structure
philippmuench
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expand unit tests to cover distribution, taxonomy, CIGAR, and strain utilities
philippmuench
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expand test coverage to 13 of 17 scripts with ~130 unit tests
philippmuench
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fix two failing test assertions
philippmuench
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expand to 200 unit tests covering file I/O, CIGAR profiles, taxonomy parsing
philippmuench
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skip get_genomes tests when biom module not available
philippmuench
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extend to 247 tests covering config conversion, strain simulation, and file
philippmuench
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