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Bugfixes for local machines #22

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Bugfixes for local machines #22

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1856552
import for module DT
moritzoc Sep 30, 2025
b46d2ae
bugfix: correct zip download in preprocessing
moritzoc Sep 30, 2025
08f72be
bugfix: upload of protocol on local machine
moritzoc Sep 30, 2025
69dfa13
TEMP bugfix: accessing analysis part on local machine
moritzoc Sep 30, 2025
cf1d945
Revert "TEMP bugfix: accessing analysis part on local machine"
moritzoc Sep 30, 2025
e1c1d53
import for module stringdist
moritzoc Sep 30, 2025
c9ef3b1
bugfix and code-cleaning
moritzoc Sep 30, 2025
1cf64f7
small error catch
moritzoc Sep 30, 2025
e07c776
typo: comment
moritzoc Oct 1, 2025
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33 changes: 16 additions & 17 deletions app.R
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Original file line number Diff line number Diff line change
Expand Up @@ -33,11 +33,12 @@ library(magrittr)
library(rjson) # write JSON files
library(jsonlite) # read JSON files


library(DT) # interactive Tables in shiny

library(igraph)

library(sortable)
library(stringdist)

library(vroom)
library(xlsx)
Expand Down Expand Up @@ -736,7 +737,7 @@ fluidPage(clusteringCAMs_overallLevelUI("clusteringCAMs_overallLevel"))
)
}

if ("approximateMatching" %in% globals$condition ||
if ("approximateMatching" %in% globals$condition ||
"searchTerms" %in% globals$condition ||
"findSynonyms" %in% globals$condition ||
"word2vec" %in% globals$condition) {
Expand Down Expand Up @@ -810,7 +811,7 @@ fluidPage(clusteringCAMs_overallLevelUI("clusteringCAMs_overallLevel"))
)
}

if ("networkIndicators" %in% globals$condition) {
if ("networkIndicators" %in% globals$condition) {
write(
"\nnetworkIndicators: .txt file of all computed network indicators",
path,
Expand All @@ -836,7 +837,7 @@ fluidPage(clusteringCAMs_overallLevelUI("clusteringCAMs_overallLevel"))
)
}

if ("networkNeighborhoodIndicators" %in% globals$condition) {
if ("networkNeighborhoodIndicators" %in% globals$condition) {
write(
"\nnetworkNeighborhoodIndicators: .txt file of all computed neighborhood indicators",
path,
Expand All @@ -861,46 +862,46 @@ fluidPage(clusteringCAMs_overallLevelUI("clusteringCAMs_overallLevel"))
path,
append = TRUE
)
}
}


if ("wordlistOverallCreated" %in% globals$condition) {
write(
if ("wordlistOverallCreated" %in% globals$condition) {
write(
"\nwordlistOverall: .txt file of overall wordlist",
path,
append = TRUE
)

write(
write(
"wordlistOverall: .xlsx (Excel) file of overall wordlist",
path,
append = TRUE
)
}

if ("singleConceptsTable" %in% globals$condition) {
write(
if ("singleConceptsTable" %in% globals$condition) {
write(
"\nsingleConceptsTable: .txt file of all drawn single concepts seperated by CAMs",
path,
append = TRUE
)

write(
write(
"singleConceptsTable: .xlsx (Excel) file of all drawn single concepts seperated by CAMs",
path,
append = TRUE
)
}


if ("CAMsSlicedCreated" %in% globals$condition) {
write(
if ("CAMsSlicedCreated" %in% globals$condition) {
write(
paste0("\nCAMs sliced datasets: .txt files (nodes, connectors, merged) created for central concept: ", globals$namingSlicedCAMs[1]),
path,
append = TRUE
)

write(
write(
paste0("CAMs sliced datasets: .txt files (nodes, connectors, merged) created for central concept: ", globals$namingSlicedCAMs[2]),
path,
append = TRUE
Expand All @@ -925,9 +926,7 @@ fluidPage(clusteringCAMs_overallLevelUI("clusteringCAMs_overallLevel"))
# write(rjson::toJSON(globals$protocol), path)
#jsonlite::write_json(x = globals$protocol, path = path)



zip(zipfile = fname, files = fs)
zip::zipr(zipfile = fname, files = fs)
},
contentType = "application/zip"
)
Expand Down
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