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Bump the dev-dependencies group with 3 updates#940

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dependabot/pip/dev-dependencies-e799165d59
Jun 3, 2026
Merged

Bump the dev-dependencies group with 3 updates#940
teutoburg merged 2 commits into
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dependabot/pip/dev-dependencies-e799165d59

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@dependabot dependabot Bot commented on behalf of github Jun 2, 2026

Bumps the dev-dependencies group with 3 updates: jupytext, myst-nb and sphinxcontrib-mermaid.

Updates jupytext from 1.19.1 to 1.19.3

Release notes

Sourced from jupytext's releases.

Version 1.19.3

Fixed

  • The Jupytext CLI issues a warning when a notebook is not trusted. Also, trust is preserved when empty outputs are added (follow-up on #1505)

Changed

  • The dependabot config has been updated to correctly bump extension packages, now allowing only production updates and ignoring dev dependencies (#1532). Thanks to Mahendra Paipuri for this PR!
  • Removed deprecated stylelint packages (stylelint-config-prettier and stylelint-prettier) from the JupyterLab extension dependencies (#1530)
  • We have removed Python 3.9 testing from the CI (Python 3.9 reached EOL in October 2025)

Version 1.19.2

Fixed

  • Trusted notebooks remain trusted after jupytext --sync (#1505)
  • We have fixed the homepage link in package.json. Thanks to Michał Krassowski for making this PR (#1494)
  • Thanks to Brigitta Sipőcz for fixing a broken link in our CLI (#1428)
  • The --quiet flag now suppresses the creating missing directory warning when writing to a path that includes a prefix (#1533)

Changed

  • The CI workflow has been restructured to maximize parallelization. All test suites (pip, conda, UI) and the build step now run concurrently after pre-commit checks, instead of sequentially, reducing CI times (#1527)
  • We have skipped the tests that involve jupyterfs on Python 3.12+ as they started failing on the CI with no obvious way to fix them (#1509)
  • We have changed the configuration of Dependabot to get grouped dependency updates for our JupyterLab extension.
  • We have merged a series of Dependabot security updates: #1516, #1517, #1519, #1520, #1522, #1524
Changelog

Sourced from jupytext's changelog.

1.19.3 (2026-05-17)

Fixed

  • The Jupytext CLI issues a warning when a notebook is not trusted. Also, trust is preserved when empty outputs are added (follow-up on #1505)

Changed

  • The dependabot config has been updated to correctly bump extension packages, now allowing only production updates and ignoring dev dependencies (#1532). Thanks to Mahendra Paipuri for this PR!
  • Removed deprecated stylelint packages (stylelint-config-prettier and stylelint-prettier) from the JupyterLab extension dependencies (#1530)
  • We have removed Python 3.9 testing from the CI (Python 3.9 reached EOL in October 2025)

1.19.2 (2026-05-10)

Fixed

  • Trusted notebooks remain trusted after jupytext --sync (#1505)
  • We have fixed the homepage link in package.json. Thanks to Michał Krassowski for making this PR (#1494)
  • Thanks to Brigitta Sipőcz for fixing a broken link in our CLI (#1428)
  • The --quiet flag now suppresses the creating missing directory warning when writing to a path that includes a prefix (#1533)

Changed

  • The CI workflow has been restructured to maximize parallelization. All test suites (pip, conda, UI) and the build step now run concurrently after pre-commit checks, instead of sequentially, reducing CI times (#1527)
  • We have skipped the tests that involve jupyterfs on Python 3.12+ as they started failing on the CI with no obvious way to fix them (#1509)
  • We have changed the configuration of Dependabot to get grouped dependency updates for our JupyterLab extension.
  • We have merged a series of Dependabot security updates: #1516, #1517, #1519, #1520, #1522, #1524
Commits
  • 48fdfd8 Fix: Adding cells with no outputs preserves trust status (#1531)
  • 4706e65 chore: Update dependabot config (#1532)
  • 2ec5404 build (deps): Remove deprecated stylelint packages (#1530)
  • 309f97f Version 1.19.2 (#1529)
  • e4dded4 build(deps-dev): bump typescript from 5.9.3 to 6.0.3 in /jupyterlab/packages/...
  • 2c262e5 Fix: --quiet also suppresses warning for directory creation (#1526)
  • 0bfcec1 build(deps): bump fast-uri from 3.1.0 to 3.1.2 in /jupyterlab (#1524)
  • 611e2c0 Explicitly close NotebookNotary signature store (#1528)
  • 70b1f20 All tests run after coverage tests have passed (#1527)
  • 399e934 Close SQLite database connections of Jupytext-created notaries
  • Additional commits viewable in compare view

Updates myst-nb from 1.3.0 to 1.4.0

Release notes

Sourced from myst-nb's releases.

v1.4.0

What's Changed

New Contributors

Full Changelog: executablebooks/MyST-NB@v1.3.0...v1.4.0

Changelog

Sourced from myst-nb's changelog.

v1.4.0 - 2026-03-02

(full changelog)

What's Changed

New Contributors

Commits

Updates sphinxcontrib-mermaid from 2.0.1 to 2.0.2

Changelog

Sourced from sphinxcontrib-mermaid's changelog.

Changelog

Unreleased

  • Add mermaid_dark_theme and mermaid_light_theme config options for configurable theme switching
Commits
  • 19be468 Merge pull request #240 from timkpaine/tkp/hatch
  • e1f9ecc Switch to hatchling
  • 42aa20a Merge pull request #239 from timkpaine/tkp/202
  • 2db5b55 bump to 2.0.2
  • 25c7ef7 Merge pull request #237 from kartben/local_paths
  • e98c6f8 increase test coverage for _use_local options
  • 1422b45 Resolve local Mermaid/ELK/ZenUML/D3 JS paths under html_static_path
  • d6d874c Merge pull request #236 from jensens/configurable-theme
  • bce5976 Document mermaid_dark_theme and mermaid_light_theme config options
  • 12bb2ac Add mermaid_dark_theme and mermaid_light_theme config options
  • See full diff in compare view

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@dependabot
Bump the dev-dependencies group with 3 updates
d5316e1 
Bumps the dev-dependencies group with 3 updates: [jupytext](https://github.com/mwouts/jupytext), [myst-nb](https://github.com/executablebooks/myst-nb) and [sphinxcontrib-mermaid](https://github.com/mgaitan/sphinxcontrib-mermaid).


Updates `jupytext` from 1.19.1 to 1.19.3
- [Release notes](https://github.com/mwouts/jupytext/releases)
- [Changelog](https://github.com/mwouts/jupytext/blob/main/CHANGELOG.md)
- [Commits](mwouts/jupytext@v1.19.1...v1.19.3)

Updates `myst-nb` from 1.3.0 to 1.4.0
- [Release notes](https://github.com/executablebooks/myst-nb/releases)
- [Changelog](https://github.com/executablebooks/MyST-NB/blob/main/CHANGELOG.md)
- [Commits](executablebooks/MyST-NB@v1.3.0...v1.4.0)

Updates `sphinxcontrib-mermaid` from 2.0.1 to 2.0.2
- [Changelog](https://github.com/mgaitan/sphinxcontrib-mermaid/blob/master/CHANGELOG.md)
- [Commits](mgaitan/sphinxcontrib-mermaid@2.0.1...2.0.2)

---
updated-dependencies:
- dependency-name: jupytext
  dependency-version: 1.19.3
  dependency-type: direct:development
  update-type: version-update:semver-patch
  dependency-group: dev-dependencies
- dependency-name: myst-nb
  dependency-version: 1.4.0
  dependency-type: direct:development
  update-type: version-update:semver-minor
  dependency-group: dev-dependencies
- dependency-name: sphinxcontrib-mermaid
  dependency-version: 2.0.2
  dependency-type: direct:development
  update-type: version-update:semver-patch
  dependency-group: dev-dependencies
...

Signed-off-by: dependabot[bot] <support@github.com>
@dependabot dependabot Bot added the dependencies Related to or updating any dependencies label Jun 2, 2026
@teutoburg teutoburg merged commit c5f18f7 into main Jun 3, 2026
22 of 24 checks passed
@teutoburg teutoburg deleted the dependabot/pip/dev-dependencies-e799165d59 branch June 3, 2026 11:54
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codecov Bot commented Jun 3, 2026 •
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Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 75.17%. Comparing base (e386ea5) to head (a213d5d).
⚠️ Report is 2 commits behind head on main.

Additional details and impacted files 
@@           Coverage Diff           @@
##             main     #940   +/-   ##
=======================================
  Coverage   75.17%   75.17%           
=======================================
  Files          70       70           
  Lines        9024     9024           
=======================================
  Hits         6784     6784           
  Misses       2240     2240

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