Drug Side Effect Tracker

An AI-powered Flask application that tracks drug side effects using LangChain agents and MCP (Model Context Protocol) servers. The app fetches real side effect data from ClinicalTrials.gov and stores it in a local SQLite database.

Features

• AI Chat Interface – Ask about drug side effects in natural language
• Real-time Data – Fetches side effect data from ClinicalTrials.gov API
• Local Database – Stores drugs and side effects in SQLite for quick access
• MCP Integration – Uses Arcade MCP server for external tool access

Architecture

┌─────────────────┐     ┌──────────────────┐     ┌─────────────────────┐
│   Flask Web UI  │────▶│  LangChain Agent │────▶│  Local Tools (DB)   │
└─────────────────┘     └──────────────────┘     └─────────────────────┘
                               │
                               ▼
                        ┌──────────────────┐     ┌─────────────────────┐
                        │   Arcade MCP     │────▶│  ClinicalTrials.gov │
                        └──────────────────┘     └─────────────────────┘

Project Structure

slide_effect_tracker/
├── agent_app/              # Main Flask application
│   ├── main.py             # Flask app & agent setup
│   ├── agent.py            # Tool definitions
│   ├── models.py           # SQLAlchemy models
│   └── templates/
│       └── home.html       # Web interface
├── side_effects_mcp/       # MCP server for clinical trials data
│   └── src/side_effects_mcp/
│       └── server.py       # MCP tool: get_side_effects_for_drugs
├── pyproject.toml
└── README.md

Requirements

• Python 3.13+
• uv package manager

Environment Variables

Create a .env file in agent_app/:

GOOGLE_API_KEY=your_google_api_key
GEMINI_MODEL=gemini-2.0-flash
ARCADE_API_KEY=your_arcade_api_key
ARCADE_USER_ID=your_arcade_user_id

Installation

# Clone and navigate to project
cd slide_effect_tracker

# Install dependencies
uv sync

# Navigate to agent app
cd agent_app
uv sync

Running the App

cd agent_app
uv run main.py

The app runs at http://127.0.0.1:5000

Available Tools

Tool	Description
list_drugs	List all drugs in the database
create_drug	Add a new drug to the database
delete_drug	Delete a drug and all its side effects
list_side_effects	List side effects for a specific drug
create_side_effect	Add a side effect report for a drug
delete_side_effect	Remove a specific side effect from a drug
get_side_effects_for_drugs	Fetch side effects from ClinicalTrials.gov (MCP)

Database Models

Drug

• id (Integer, PK)
• drug_name (String)

SideEffectReport

• id (Integer, PK)
• side_effect_name (String)
• side_effect_probability (Float)
• drug_id (FK → Drug)

Example Queries

• "What are the side effects of Aspirin?"
• "Add Ibuprofen to the database"
• "Delete headache side effect from Aspirin"
• "List all drugs"