Add full Bowtie2 index and reference FASTA for host contamination testing - #4
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Alexaz13 wants to merge 4 commits into
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Add full Bowtie2 index and reference FASTA for host contamination testing#4Alexaz13 wants to merge 4 commits into
Alexaz13 wants to merge 4 commits into
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We shouldn't merge the test data to master. Each pipeline has a dedicated branch (and a special one for modules). |
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This PR adds the necessary files to support nf-test testing of the
bowtie2_alignmodule with the PolyBio dataset. Specifically, it includes:hg38.*.bt2files) for the human genome.GCA_009914755.4_T2T-CHM13v2.0_genomic.fna).These files were added in accordance with nf-core guidelines for test datasets.
Purpose
These additions will allow us to:
bowtie2_alignmodule using human reference genome alignment.Notes
polybio/host/andpolybio/ncbi_genome/to maintain organization.