Hello,
I have used COMEBin (installed via bioconda) with different contigs before, and I had no issues. But now with new contigs, I am getting a weird error:
2026-04-03 22:22:39,804 - markerCmd failed! Not exist: /home/yisraell/.conda/envs/comebin_env/bin/COMEBin/../auxiliary/test_getmarker_2quarter.pl /scratch02/public/genomics/yisraell/PowerSoil_Host-Free_No-G_Reads/All_PowerSoil_metaSPAdes_contigs.fasta.bacar_marker.hmmout /scratch02/public/genomics/yisraell/PowerSoil_Host-Free_No-G_Reads/All_PowerSoil_metaSPAdes_contigs.fasta 1001 /scratch02/public/genomics/yisraell/PowerSoil_Host-Free_No-G_Reads/All_PowerSoil_metaSPAdes_contigs.fasta.bacar_marker.2quarter_lencutoff_1001.seed
Can you help me, please?
Hello,
I have used COMEBin (installed via bioconda) with different contigs before, and I had no issues. But now with new contigs, I am getting a weird error:
2026-04-03 22:22:39,804 - markerCmd failed! Not exist: /home/yisraell/.conda/envs/comebin_env/bin/COMEBin/../auxiliary/test_getmarker_2quarter.pl /scratch02/public/genomics/yisraell/PowerSoil_Host-Free_No-G_Reads/All_PowerSoil_metaSPAdes_contigs.fasta.bacar_marker.hmmout /scratch02/public/genomics/yisraell/PowerSoil_Host-Free_No-G_Reads/All_PowerSoil_metaSPAdes_contigs.fasta 1001 /scratch02/public/genomics/yisraell/PowerSoil_Host-Free_No-G_Reads/All_PowerSoil_metaSPAdes_contigs.fasta.bacar_marker.2quarter_lencutoff_1001.seed
Can you help me, please?