Extraction of MS/MS spectra from different collision energy acquired by Agilent 6545 TOF

[QizhiSu]

Hi,

We are currently using Agilent 6545 TOF. Since there are 3 collision energy applied, normally 10, 20, 40V, I am curious which MS/MS spectra will be used by MS-DIAL? Is there any way to select the spectra that I want or even average spectra from all the 3 collision energies?

Thanks in advance.

Sukis

[kozo2]

Hi @QizhiSu ,
Thank you for the question. I believe this is a pure question unrelated to the code, so I will convert it from an GitHub Issue to a GitHub Discussion Q&A.